Job Description P77398 Confidence 99.26% Date Thu Jan 5 12:28:36 GMT 2012 Rank 181 Aligned Residues 228 % Identity 14% Template c3ak4C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-dependent quinuclidinone reductase; PDBTitle: crystal structure of nadh-dependent quinuclidinone reductase from2 agrobacterium tumefaciens Resolution 2.00 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.							.	.	.	.
Predicted Secondary structure																																															.	.																								.	.	.	.	.	.
Query SS confidence																																															.	.																								.	.	.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	.	K	C	D	V
Query Conservation																																															.	.																								.	.	.	.	.	.
Alig confidence																												.																			.	.																								.	.	.	.	.	.
Template Conservation																												.
Template Sequence		S	G	R	K	A	I	V	T	G	G	S	K	G	I	G	A	A	I	A	R	A	L	D	K	A	G	.	A	T	V	A	I	A	D	L	D	V	M	A	A	Q	A	V	V	A	G	L	E	N	G	G	F	A	V	E	V	D	V	T	K	R	A	S	V	D	A	A	M	Q	K	A	I	D	A	L	G	G	F	D	L
Template Known Secondary structure		T	T							T	T	T	S													T	T	.								S											T		T	T									T	T																	T	S
Template Predicted Secondary structure																												.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.									.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.																															.	.
Query SS confidence											.	.	.	.	.	.	.	.																															.	.
Query Sequence		V	L	P	L	V	A	I	A	T	.	.	.	.	.	.	.	.	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P
Query Conservation											.	.	.	.	.	.	.	.																															.	.
Alig confidence											.	.	.	.	.	.	.	.																															.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	C	A	N	A	G	V	S	T	M	R	P	A	V	D	I	T	D	E	E	W	D	F	N	F	D	V	N	A	R	G	V	F	L	A	N	Q	I	A	C	R	H	F	L	A	S	N	T	K	G	V	I	V	N	T	A	S	L	A	A	K	V	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														G	G	G														T																		T											G	G	G	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K
Query Conservation																											.	.	.
Alig confidence		.	.																								.	.	.																																												.	.	.	.	.	.	.	.
Template Conservation		.	.																																																																						.	.	.	.	.	.	.	.
Template Sequence		.	.	P	L	L	A	H	Y	S	A	S	K	F	A	V	F	G	W	T	Q	A	L	A	R	E	M	A	P	K	N	I	R	V	N	C	V	C	P	G	F	V	K	T	A	M	Q	E	R	E	I	I	W	E	A	E	L	R	G	M	T	P	E	A	V	R	A	E	Y	V	S	L	.	.	.	.	.	.	.	.	T
Template Known Secondary structure		.	.	T	T																							G	G	G	T										S	B		S															T													T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																																																						.	.	.	.	.	.	.	.
Template SS confidence
				151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.									220
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	G	R	I	E	E	P	E	D	V	A	D	V	V	V	F	L	A	S	D	A	A	R	F	M	T	G	Q	G	I	N	V	T	G	G
Template Known Secondary structure		T	T		S		B														S	G	G	G	T	T			S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions