Job Description P77398 Confidence 96.40% Date Thu Jan 5 12:28:36 GMT 2012 Rank 444 Aligned Residues 98 % Identity 16% Template c2v6bB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: crystal structure of lactate dehydrogenase from deinococcus2 radiodurans (apo form) Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.									.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																									.	.																		.	.	.	.	.	.	.	.
Query SS confidence																									.	.																		.	.	.	.	.	.	.	.
Query Sequence		R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	.	.	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	.	.	.	.	.	.	.	.	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C	D	V	V
Query Conservation																									.	.																		.	.	.	.	.	.	.	.
Alig confidence									.																.	.		.																.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation									.																			.																																					.	.	.	.	.	.	.	.
Template Sequence		K	V	G	V	V	G	T	.	G	F	V	G	S	T	A	A	F	A	L	V	L	R	G	S	C	S	.	E	L	V	L	V	D	R	D	E	D	R	A	Q	A	E	A	E	D	I	A	H	A	A	P	V	S	H	G	T	R	V	W	H	G	G	H	.	.	.	.	.	.	.	.	S	E	L	A	D	A	Q	V	V
Template Known Secondary structure									.	S														T			S	.							S	S													T	T			G	G	G									G	.	.	.	.	.	.	.	.	G	G	G	T	T		S
Template Predicted Secondary structure									.																			.																																					.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.									.	.	.	.	.	.	90	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	K	R	I	I	F	P	S
Query Conservation																																								.	.
Alig confidence							.	.	.	.	.	.	.																											.	.
Template Conservation							.	.	.	.	.	.	.
Template Sequence		I	L	T	A	G	.	.	.	.	.	.	.	A	E	S	R	L	D	L	L	E	K	N	A	D	I	F	R	E	L	V	P	Q	I	T	R	A	A	P	D	A	V	L	L	V	T	S
Template Known Secondary structure							.	.	.	.	.	.	.																											T	T	S						S
Template Predicted Secondary structure							.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions