Job Description P77398 Confidence 96.67% Date Thu Jan 5 12:28:36 GMT 2012 Rank 425 Aligned Residues 106 % Identity 22% Template c2v65A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase a chain; PDBTitle: apo ldh from the psychrophile c. gunnari Resolution 2.35 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.									360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																					.	.	.	.	.	.	.	.
Query SS confidence																																.	.																					.	.	.	.	.	.	.	.
Query Sequence		C	T	A	R	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	.	.	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	.	.	.	.	.	.	.	.	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H
Query Conservation																																.	.																					.	.	.	.	.	.	.	.
Alig confidence																.																.	.		.																			.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																.																			.																																					.	.	.	.	.	.	.	.
Template Sequence		E	P	V	G	S	R	S	K	V	T	V	V	G	V	.	G	M	V	G	M	A	S	A	I	S	I	L	L	K	D	L	C	D	.	E	L	A	M	V	D	V	M	E	D	K	L	K	G	E	V	M	D	L	Q	H	G	S	L	F	L	K	T	K	I	V	G	D	K	D	Y	.	.	.	.	.	.	.	.	S	V
Template Known Secondary structure							S	S								.	S													T	T			S	.							S														T	T	G	G	G			S						S	S	G	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																.																			.																																					.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.									.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		V	K	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	K	R	I	I	F	P	S
Query Conservation																																															.	.
Alig confidence																	.	.	.	.	.	.																									.	.
Template Conservation																	.	.	.	.	.	.
Template Sequence		T	A	N	S	K	V	V	V	V	T	A	G	A	G	E	.	.	.	.	.	.	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	Y	S	P	N	C	I	L	M	V	V	S
Template Known Secondary structure		G	T	T		S											.	.	.	.	.	.																									T	T							S
Template Predicted Secondary structure																	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions