Job Description P77398 Confidence 98.78% Date Thu Jan 5 12:28:36 GMT 2012 Rank 307 Aligned Residues 159 % Identity 18% Template c2uv8C_ PDB info PDB header:transferase Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution Resolution 3.10 Å

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		315	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.										360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure										.																																						.	.	.	.	.	.	.	.	.																							.	.	.
Query SS confidence										.																																						.	.	.	.	.	.	.	.	.																							.	.	.
Query Sequence		R	T	R	V	L	I	L	G	.	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	.	.	.	.	.	.	.	.	.	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.
Query Conservation										.																																						.	.	.	.	.	.	.	.	.																							.	.	.
Alig confidence										.																																						.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		D	K	Y	V	L	I	T	G	A	G	K	G	S	I	G	A	E	V	L	Q	G	L	L	Q	G	G	A	K	V	V	V	T	T	S	R	F	S	K	Q	V	T	D	Y	Y	Q	S	I	Y	A	K	Y	G	A	K	G	S	T	L	I	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	I	E	F	I	Y	D
Template Known Secondary structure		T							S			S	S	S												T	T								S	S																			T	T										T	T														S
Template Predicted Secondary structure
Template SS confidence
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
											382	.	.	.	.	.	.	.	390	.	.	.	.	.								.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.				.	.	.	.	.	.	.	.	420	.	.	.	.	.	.						.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																	.	.	.																.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																	.	.	.																.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	K	C	D	V	V	L	P	L	V	A	I	A	T	P	.	.	.	.	.	.	.	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	.	.	.	E	N	L	R	I	I	R	Y	C	V	K	Y	R	K	R	.	.	.	.	.	I	I	F	P	S	T	S	E	V	Y	G
Query Conservation		.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																	.	.	.																.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		T	E	K	N	G	G	L	G	W	D	L	D	A	I	I	P	F	A	A	I	P	E	Q	G	I	E	L	E	H	I	D	S	K	S	E	F	A	H	R	I	M	L	T	N	I	L	R	M	M	G	C	V	K	K	Q	K	S	A	R	G	I	E	T	R	P	A	Q	V	I	L	P	M	S	P	N	H	G	T	F	G
Template Known Secondary structure			T	T	T	T	S						S												S	B		G	G	G													T																T	T	T			S											S		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		755	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		G	D	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	E	S	K	L	S	L	E	T	L	F	N	R	.	W	H	S	E	S	W	A	N	Q	L	T	V	C	G	A	I	I	G
Template Known Secondary structure			B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G					.				S	S		T	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		835	.	.	.																						.	840	.	.	.	.	.	.	.	.	.	850	.	.		.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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