Job Description P77398 Confidence 98.73% Date Thu Jan 5 12:28:36 GMT 2012 Rank 311 Aligned Residues 215 % Identity 14% Template c2qhxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:pteridine reductase 1; PDBTitle: structure of pteridine reductase from leishmania major2 complexed with a ligand Resolution 2.61 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.								.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	.	.	.	.	.	.	.	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.																	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.
Template Sequence		V	P	V	A	L	V	T	G	A	A	K	R	L	G	R	S	I	A	E	G	L	H	A	E	G	.	Y	A	V	C	L	H	Y	H	R	S	A	A	E	A	N	A	L	S	A	T	L	N	A	R	R	P	N	S	A	I	T	V	Q	A	D	L	S	N	V	A	T	A	P	S	A	P	V	T	L	F	T	R	C	A
Template Known Secondary structure								T	T		S	S												T	T	T	.								S	S																S	T	T										S	S	S		B						B
Template Predicted Secondary structure																											.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
			372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.						.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.												.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure		.																								.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																								.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	H	S	E	W	I	E	Y	H	V	K	K	C	D	V	V	L	P	L	V	A	I	A	T	.	.	.	.	.	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	.	.	.	.	.	.	.	.	.	.	.	R	K	R	I	I	F	P	S	T	S	E
Query Conservation		.																								.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																								.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	V	A	A	C	Y	T	H	W	G	R	C	D	V	L	V	N	N	A	S	S	F	Y	P	T	P	L	L	R	E	A	M	E	T	A	T	A	D	L	F	G	S	N	A	I	A	P	Y	F	L	I	K	A	F	A	H	R	V	A	G	T	P	A	K	H	R	G	T	N	Y	S	I	I	N	M	V	D	A	M
Template Known Secondary structure												S																	S																	T																	S		G	G	G	S		S										T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480				.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	.	.	.	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A
Query Conservation																																																.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	Q	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	Y	T	I	Y	T	M	A	K	G	A	L	E	G	L	T	R	S	A	A	L	E	L	A	P	L	Q	I	R	V	N	G	V	G	P	G	L	S	V	L	V	D	D	M	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																							G	G	G	T									S	S	B	S					S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.																			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Query Conservation
Alig confidence		.														.	.	.	.	.	.	.	.
Template Conservation		.														.	.	.	.	.	.	.	.
Template Sequence		.	P	A	V	W	E	G	H	R	S	K	V	P	L	.	.	.	.	.	.	.	.	Y	Q	R	D	S	S	A	A	E	V	S	D	V	V	I	F	L	C	S	S	K	A	K	Y	I	T	G	T	C	V	K	V	D	G	G
Template Known Secondary structure		.									T	T	S	T	T	.	.	.	.	.	.	.	.	T	T	S		B														S	G	G	G	T	T			S						S	T	T
Template Predicted Secondary structure		.														.	.	.	.	.	.	.	.
Template SS confidence
			235	.	.	.	.	240	.	.	.	.	.	.	.									.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions