Job Description P77398 Confidence 100.00% Date Thu Jan 5 12:28:36 GMT 2012 Rank 64 Aligned Residues 293 % Identity 21% Template c2q1wC_ PDB info PDB header:sugar binding protein Chain: C: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme wbmh in2 complex with nad+ Resolution 2.19 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																															.																								.
Query SS confidence																																															.																								.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	K	C	D	V	V	L	P	L	V	A
Query Conservation																																															.																								.
Alig confidence																												.																			.																								.
Template Conservation																												.
Template Sequence		H	M	K	K	V	F	I	T	G	I	C	G	Q	I	G	S	H	I	A	E	L	L	L	E	R	G	.	D	K	V	V	G	I	D	N	F	A	T	G	R	R	E	H	L	K	D	H	P	N	L	T	F	V	E	G	S	I	A	D	H	A	L	V	N	Q	L	I	G	D	L	Q	P	D	A	V	V	H	T	A	A
Template Known Secondary structure										T	T	T	S													T	T	.										S	S			G	G	G	S				T	T								T	T															S
Template Predicted Secondary structure																												.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L
Query Conservation																																			.
Alig confidence						.	.	.																											.																									.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.																																																				.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	K	D	.	.	.	P	D	D	W	Y	N	D	T	L	T	N	C	V	G	G	S	N	V	V	Q	A	A	K	K	N	N	V	G	R	F	V	Y	F	Q	T	A	L	C	Y	G	V	K	P	I	Q	Q	P	V	R	L	D	.	.	.	.	.	.	.	.	.	H	P	R	N	P	A	N	S	S	Y	A	I	S
Template Known Secondary structure				S		.	.	.	T	T										T													T	T		S								G	G	G	G		S	S		S	S	S	S	B		T	T	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure						.	.	.																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		K	S	A	N	E	D	Y	L	E	Y	S	G	L	D	F	V	T	F	R	L	A	N	V	V	G	P	R	N	S	G	P	.	.	.	.	.	.	.	.	.	.	L	P	I	F	F	Q	R	L	S	E	G	K	K	C	F	V	T	.	.	.	K	A	R	R	D	F	V	F	V	K	D	L	A	R	A	T	V	R	A
Template Known Secondary structure																						S				S	T	T					.	.	.	.	.	.	.	.	.	.										T	T							.	.	.	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.											.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	K	P	S	I	R	N	A	H	R	C	L
Query Conservation
Alig confidence							.	.	.	.												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	G	V	G	.	.	.	.	H	G	A	Y	H	F	S	S	G	T	D	.	V	A	I	K	E	L	Y	D	A	V	V	E	A	M	A	L	P	S	Y	P	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	R	E	L	G	A	P	S	I	L	L	D	P	S	R	T	I	Q	D	F
Template Known Secondary structure			T	T			.	.	.	.							S		S			.															T		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									B			B
Template Predicted Secondary structure							.	.	.	.												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.																	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	E	P	K	I	D	M	Q	E	T	I	D	E	T	L	D	F	F	L	R	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	I	E	F	T	P	L	K	E	T	V	A	A	A	V	A	Y	F	R	E	Y	G
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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