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Job DescriptionP77398
Confidence100.00%DateThu Jan 5 12:28:36 GMT 2012
Rank50Aligned Residues310
% Identity20%Templatec2q1uA_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme wbmf in2 complex with nad+ and udp
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   308.310.........320.........330.........340........ .350.........360.........370.........380.....
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Query Sequence  PACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI. . GSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDV
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Template Sequence  NASKLAN. TNVMVVGGAGFVGSNLVKRLLELG. VNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLAS. LQDEYDY
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GGGGTT.
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   6...10.. .......20.........30...... ...40.........50.........60.........70..... ....80..
 
   386...390.........400.........410.........420.... .....430.........440.........450.........460....
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Query Sequence  VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR. KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS
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Template Sequence  VFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGEE. . . . . . . . . . . . . . TDIVSLHNNDSPYS
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   83......90.........100.........110.........120.........130.... .....140........
 
   465....470.........480.........490.........500.........510 .........520.........530.........
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Query Sequence  VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSR. . . . . AITQLILNLVEGSPIKLIDGGKQKRCFTD
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Template Sequence  MSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIF
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   540.........550.........560.........570.........580.........590.........600.........610.........
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Query Sequence  IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHR
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Template Sequence  VEDVANGLIACAAD. . . GTPGGVYNIASGKE. TSIADLATKINEITGNNTELDRLPKRPW. . . . . . . . . . . . . . DNSGKR
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   243......250...... ...260.........270 .........280.........290........ .300....
 
   620.........630.........640.........650..
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Query Sequence  KPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT
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Template Sequence  FGSPEKARRELGFSADVSIDDGLRKTIEWTKAN
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   305....310.........320.........330.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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