Return to main results Retrieve Phyre Job Id

Job DescriptionP77398
Confidence97.18%DateThu Jan 5 12:28:36 GMT 2012
Rank380Aligned Residues110
% Identity19%Templatec2pwzG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the apo form of e.coli malate dehydrogenase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   317..320.........330......... 340.........350..... ....360.........370.........380.........390.
Predicted Secondary structure 





..






...
















Query SS confidence 






















. .















. . .



































Query Sequence  RVLILGVNGFIGNHLTERLLRED. . HYEVYGLDIGSDAISR. . . FLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA
Query Conservation 












 

  

  
.. 
 
  
 
       ...         
  

              
 





Alig confidence 






















..















...
















...















Template Conservation 

 


  
 

   
  
        

 
 
          

                ...    
  








Template Sequence  KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGED. . . ATPALEGADVVLISAG
Template Known Secondary structure  TTTSS
TT
SSTTTS
SS
SS
...
TT
S


Template Predicted Secondary structure 


















...







Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.. .......70........
 
   392.......400.........410.........420.... .....430.
Predicted Secondary structure 





..


Query SS confidence 
































. .






Query Sequence  IATPIEYTRNPLRVFELDFEENLRIIRYCVKYR. . KRIIFPS
Query Conservation                   

 

 




     .. 


  
Alig confidence 





..
























..






Template Conservation        ..  
   
  
  
   
   
    
  
 



Template Sequence  VARKPG. . MDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT
Template Known Secondary structure 



SS..


TTS
S
Template Predicted Secondary structure 





..





Template SS confidence 









































   7980.... .....90.........100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions