Job Description P77398 Confidence 98.10% Date Thu Jan 5 12:28:36 GMT 2012 Rank 333 Aligned Residues 152 % Identity 14% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

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		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.				.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																					.																	.	.	.
Query SS confidence																																					.																	.	.	.
Query Sequence		P	A	C	T	A	R	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	.	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	.	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C
Query Conservation																																					.																	.	.	.
Alig confidence																		.																			.																	.	.	.
Template Conservation																		.
Template Sequence		N	T	K	K	I	L	F	K	N	R	F	V	I	L	G	F	.	G	C	V	G	Q	A	L	X	P	L	I	F	E	K	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	A	Q	Q	Y	G	V	S	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	V	I	G	S	T	L	E	E	N
Template Known Secondary structure			T	T		B				S								.	S														B				G	G	G						S	S			S								T										T	T	T					T	G	G	G			T	T
Template Predicted Secondary structure																		.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	L	I	D	V	S	I	G	I	S	S	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	I	L	C	N	Q	K	G	A	L	Y	I	N	A	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	W	K	E	R	R	T	N	Y
Template Known Secondary structure									S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T						S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.																			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																						.	.	.	.	120	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V
Query Conservation
Alig confidence					.	.	.	.	.													.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.													.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Sequence		S	L	R	.	.	.	.	.	E	E	V	L	R	L	K	D	K	T	Q	K	.	.	.	.	.	.	.	T	A	L	I	T	H	G	A	N	P	.	.	.	.	.	.	.	.	.	G	L	V	S	H	F	I	K	E	A	L
Template Known Secondary structure					.	.	.	.	.					T	T	T	T	T			S	.	.	.	.	.	.	.					S		B	T	T	T	.	.	.	.	.	.	.	.	.	B
Template Predicted Secondary structure					.	.	.	.	.													.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.						.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.	.	.	.	.	.	160										.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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