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Job DescriptionP77398
Confidence99.60%DateThu Jan 5 12:28:36 GMT 2012
Rank116Aligned Residues216
% Identity14%Templatec2jahB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:clavulanic acid dehydrogenase; PDBTitle: biochemical and structural analysis of the clavulanic acid2 dehydeogenase (cad) from streptomyces clavuligerus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   311........320.........330.........340.........350........ .360.........370.........380.
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Query Sequence  TARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN. . . . . HPHFHFVEGDISIHSEWIEYHVK. . . .
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Template Sequence  SALQGKVALITGASSGIGEATARALAAEG. AAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA
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TTTT
STTSTT.
S
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TT
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   3......10.........20.........30. ........40.........50.........60.........70.........80.
 
   382.......390.........400.........410..... ....420.........430.........440.........450.
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Query Sequence  . . KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLR. . . . . . . . IIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNL
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Template Sequence  LGGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXYXTRAALPHLLRSKGTVVQXSSIAGRV. . . . . . . . . . . . . .
Template Known Secondary structure  S

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STT

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   82.......90.........100.........110.........120.........130.........140.......
 
   452.......460.........470.........480 .........490.........500.........510.........520........
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Query Sequence  IVGPVNKPRWIYSVSKQLLDRVIWAYGEK. . . EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI
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Template Sequence  . . . . NVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHI. . . . . THTATKEXYEQRISQIR. . . . .
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TT
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   148.150.........160.........170.........180.........190...... ...200.........210...
 
   529530.........540.........550.........560...
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Query Sequence  DGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEII
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Template Sequence  . . . . . . . . KLQAQDIAEAVRYAVTAPHHATVHEIF
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B
S
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   214.....220.........230.........240
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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