Job Description P77398 Confidence 97.65% Date Thu Jan 5 12:28:36 GMT 2012 Rank 347 Aligned Residues 109 % Identity 16% Template c2fnzA_ PDB info
PDB header: oxidoreductaseChain: A: PDB Molecule: lactate dehydrogenase;
PDBTitle: crystal structure of the lactate dehydrogenase from cryptosporidium2 parvum complexed with cofactor (b-nicotinamide adenine dinucleotide)3 and inhibitor (oxamic acid)
Resolution 2.50 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
312 . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350 . . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 .
Predicted Secondary structure
. . . . . . . . . .
Query SS confidence
.
.
.
.
.
.
.
.
.
.
Query Sequence
A R R R T R V L I L G V N G F I G N H L T E R L L R E D H Y E V Y G L D I G S .
.
.
.
.
.
.
.
.
.
D A I S R F L N H P H F H F V E G D I S I H S E W I E Y H V K
Query Conservation
. . . . . . . . . .
Alig confidence
. . . . . . . . . . . . . . . . . . .
Template Conservation
. . . . . . . . .
Template Sequence
M I E R R K I A V I G S .
G Q I G G N I A Y I V G K D N L A D V V L F D I A E G I P Q G K A L D I T H S M V M F G S T S K V I G T N D .
.
.
.
.
.
.
.
Y A D I S
Template Known Secondary structure
. S T S S S S S T . . . . . . . . G G G G T
Template Predicted Secondary structure
. . . . . . . . .
Template SS confidence
17 . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . .
382 . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420 . . . . . . . . . 430 .
Predicted Secondary structure
. .
Query SS confidence
.
.
Query Sequence
K C D V V L P L V A I A T P I E Y T R N P L R V F E L D F E E N L R I I R Y C V K Y R .
.
K R I I F P S
Query Conservation
. .
Alig confidence
. . . .
Template Conservation
. .
Template Sequence
G S D V V I I T A S I P G R P K D D R S .
.
E L L F G N A R I L D S V A E G V K K Y C P N A F V I C I T
Template Known Secondary structure
T S S S S S G G . . G G T T S
Template Predicted Secondary structure
. .
Template SS confidence
90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
