Phyre 2 alignment of P77398 with c2exxB

Job Description P77398
Confidence 99.95% Date Thu Jan 5 12:28:36 GMT 2012

Rank 97 Aligned Residues 272

% Identity 11% Template c2exxB_

PDB info PDB header:unknown function Chain: B: PDB Molecule:hscarg protein; PDBTitle: crystal structure of hscarg from homo sapiens in complex with nadp

Resolution 2.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C	D	V	V	L	P	L	V	A	I	A
Query Conservation																																													.
Alig confidence																																													.																				.
Template Conservation																																																																	.
Template Sequence	K	K	L	V	V	V	F	G	G	T	G	A	Q	G	G	S	V	A	R	T	L	L	E	D	G	T	F	K	V	R	V	V	T	R	N	P	R	K	K	A	A	K	E	L	R	L	Q	G	A	E	V	V	Q	G	D	Q	D	D	Q	V	I	M	E	L	.	A	L	N	G	A	Y	A	T	F	I	V	T	N	Y	W
Template Known Secondary structure								T	T	T	S															S	S							S	S	T	T	S									T	T								S	S								.			T	T		S								S	S
Template Predicted Secondary structure																																																																	.
Template SS confidence
	4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

	394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R
Query Conservation																																.
Alig confidence			.	.	.	.	.	.	.	.																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	E	S	.	.	.	.	.	.	.	.	C	S	Q	E	Q	E	V	K	Q	G	K	L	L	A	D	L	A	R	R	L	G	L	H	Y	V	V	Y	S	G	L	E	N	I	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	A	G	R	L	A	A	A	H	F	D	G	K	G	E	V	E	E
Template Known Secondary structure	S		.	.	.	.	.	.	.	.	S																			T	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	83	.									.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

	473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E
Query Conservation
Alig confidence							.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	Y	F	R	D	I	G	.	.	.	.	V	P	M	T	S	V	R	L	P	C	Y	F	E	N	L	L	S	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	Q	K	A	P	D	G	K	S	Y	L	V	P	M	D	G	M	S	V	S	D	L	G	P	V	V	L	S	L	L	K
Template Known Secondary structure						T	.	.	.	.												G	G	G	G	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	T	T	T	T													G	G	G
Template Predicted Secondary structure							.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	139	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

	553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	K	P	S	I	R	N	A	H	R	C	L	D	W
Query Conservation
Alig confidence				.												.	.																																															.	.	.	.	.									.
Template Conservation				.												.	.																																															.	.	.	.	.									.
Template Sequence	M	P	E	.	K	Y	V	G	Q	N	I	G	L	S	T	.	.	C	R	H	T	A	E	E	Y	A	A	L	L	T	K	H	T	R	K	V	V	H	D	A	K	M	T	P	E	D	Y	E	K	D	L	A	N	M	F	R	F	Y	A	L	R	P	D	.	.	.	.	.	R	D	I	E	L	T	L	R	.	L	N	P
Template Known Secondary structure				.			T	T							S	.	.																	T	S									T	T	T	T	T											T	T				.	.	.	.	.									.			T
Template Predicted Secondary structure				.												.	.																																															.	.	.	.	.									.
Template SS confidence
	203	.	.		.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270		.	.	.

	633	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	P	K	I	D	M	Q	E	T	I	D	E
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence	K	A	L	.	T	L	D	Q	W	L	E	Q
Template Known Secondary structure	T			.								T
Template Predicted Secondary structure				.
Template SS confidence
	281	.	.		.	.	.	.	.	.	290	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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