Job Description P77398 Confidence 99.44% Date Thu Jan 5 12:28:36 GMT 2012 Rank 122 Aligned Residues 221 % Identity 15% Template c2dteB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glucose 1-dehydrogenase related protein; PDBTitle: structure of thermoplasma acidophilum aldohexose dehydrogenase (aldt)2 in complex with nadh Resolution 1.65 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.							.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	.	K	C	D	V	V	L
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																												.													.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																												.													.	.	.	.	.	.
Template Sequence		R	D	K	V	V	I	V	T	G	A	S	M	G	I	G	R	A	I	A	E	R	F	V	D	E	G	.	S	K	V	I	D	L	S	I	H	D	P	G	.	.	.	.	.	.	E	A	K	Y	D	H	I	E	C	D	V	T	N	P	D	Q	V	K	A	S	I	D	H	I	F	K	E	Y	G	S	I	S	V	L	V
Template Known Secondary structure		T	T							T		S	S													T	T	.								S	S				.	.	.	.	.	.	S		S	S							T	T																	S
Template Predicted Secondary structure																												.													.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.										.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.
Query Sequence		P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	.	.	.	.	.	.	.	.	.	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K
Query Conservation																																						.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	N	A	G	I	E	S	Y	G	K	I	E	S	M	S	M	G	E	W	R	R	I	I	D	V	N	L	F	G	Y	Y	Y	A	S	K	F	A	I	P	Y	M	I	R	S	R	D	P	S	I	V	N	I	S	S	V	Q	A	S	I	I	T	K	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										B		T	T	T	S													T															T	T	S	S	S									G	G	G	T	S			T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.			.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500		.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure																									.	.																				.
Query SS confidence																									.	.																				.
Query Sequence		P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	.	.	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	.	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R
Query Conservation																									.	.																				.
Alig confidence		.	.																						.	.																				.																										.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																																					.	.	.	.	.	.	.	.	.
Template Sequence		.	.	S	A	Y	V	T	S	K	H	A	V	I	G	L	T	K	S	I	A	L	D	Y	A	P	L	L	R	C	N	A	V	C	P	A	T	I	D	T	P	L	V	R	K	A	A	E	L	E	V	G	S	D	P	M	R	I	E	K	K	I	S	E	W	G	H	E	H	P	M	.	.	.	.	.	.	.	.	.	Q
Template Known Secondary structure		.	.																						T	T	T	S									S	B	S	S													S																S	T	T	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure		.	.																																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
				143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210										.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	G	K	P	Q	E	V	A	S	A	V	A	F	L	A	S	R	E	A	S	F	I	T	G	T	C	L	Y	V	D	G	G
Template Known Secondary structure		S		B														S	G	G	G	T	T			S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions