Job Description P77398 Confidence 96.13% Date Thu Jan 5 12:28:36 GMT 2012 Rank 461 Aligned Residues 105 % Identity 15% Template c1lldA_ PDB info PDB header:oxidoreductase(choh (d)-nad (a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: molecular basis of allosteric activation of bacterial l-lactate2 dehydrogenase Resolution 2.00 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.										.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																											.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.																.	.	.	.	.	.	.	.	.
Query Sequence		R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	.	.	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	.	.	.	.	.	.	.	.	.	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C
Query Conservation																											.	.																.	.	.	.	.	.	.	.	.
Alig confidence											.																.	.		.														.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation											.																			.																																						.	.	.	.	.	.	.	.
Template Sequence		P	T	K	L	A	V	I	G	A	.	G	A	V	G	S	T	L	A	F	A	A	A	Q	R	G	I	A	R	.	E	I	V	L	E	D	I	A	K	E	R	V	E	A	E	V	L	D	M	Q	H	G	S	S	F	Y	P	T	V	S	I	D	G	S	D	D	P	.	.	.	.	.	.	.	.	E	I	C	R	D	A
Template Known Secondary structure											.	S													T	T			S	.							S	S														T	G	G	G	S	T	T							S		G	.	.	.	.	.	.	.	.	G	G	G	T	T
Template Predicted Secondary structure											.																			.																																						.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70									.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	K	R	I	I	F	P	S
Query Conservation																																											.	.
Alig confidence																			.	.																							.	.
Template Conservation																			.	.
Template Sequence		D	M	V	V	I	T	A	G	P	R	Q	K	P	G	Q	S	R	.	.	L	E	L	V	G	A	T	V	N	I	L	K	A	I	M	P	N	L	V	K	V	A	P	N	A	I	Y	M	L	I	T
Template Known Secondary structure		S												T	T				.	.																							T	T	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions