Job Description P77398 Confidence 95.39% Date Thu Jan 5 12:28:36 GMT 2012 Rank 498 Aligned Residues 102 % Identity 16% Template c1ldbA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-l-lactate dehydrogenase; PDBTitle: structure determination and refinement of bacillus2 stearothermophilus lactate dehydrogenase Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.								.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																	.												.	.	.	.	.	.	.
Query SS confidence																																	.												.	.	.	.	.	.	.
Query Sequence		T	A	R	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	.	E	V	Y	G	L	D	I	G	S	D	A	.	.	.	.	.	.	.	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K
Query Conservation																																	.												.	.	.	.	.	.	.
Alig confidence															.																		.												.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation															.																																																					.	.	.	.	.	.	.	.
Template Sequence		K	N	N	G	G	A	R	V	V	V	I	G	A	.	G	F	V	G	A	S	Y	V	F	A	L	M	N	Q	G	I	A	D	E	I	V	L	I	D	A	N	E	S	K	A	I	G	D	A	M	D	F	N	H	G	K	V	F	A	P	K	P	V	D	I	W	D	.	.	.	.	.	.	.	.	Y	D	D	C	R	D
Template Known Secondary structure			S			S	S								.	S												T	T	T			S							S	S															G	G	G	T	T								.	.	.	.	.	.	.	.	G	G	G		S	S
Template Predicted Secondary structure															.																																																					.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80									.	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	K	R	I	I	F	P	S
Query Conservation																																												.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	L	V	V	I	C	A	G	A	N	.	.	.	.	.	.	.	.	.	.	D	L	V	D	K	N	I	A	I	F	R	S	I	V	E	S	V	M	A	S	G	F	Q	G	L	F	L	V	A	T
Template Known Secondary structure			S										.	.	.	.	.	.	.	.	.	.																				T	T			S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.											100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions