Job Description P77398 Confidence 96.63% Date Thu Jan 5 12:28:36 GMT 2012 Rank 427 Aligned Residues 99 % Identity 15% Template c1cf2Q_ PDB info PDB header:oxidoreductase Chain: Q: PDB Molecule:protein (glyceraldehyde-3-phosphate PDBTitle: three-dimensional structure of d-glyceraldehyde-3-phosphate2 dehydrogenase from the hyperthermophilic archaeon3 methanothermus fervidus Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.											.	.	380	.	.	.
Predicted Secondary structure																																		.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	.	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	.	.	.	.	.	.	.	.	.	.	Y	H	V	K	K	C
Query Conservation																																		.																																.	.	.	.	.	.	.	.	.	.
Alig confidence										.																								.																																.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		M	K	A	V	A	I	N	G	.	Y	G	T	V	G	K	R	V	A	D	A	I	A	Q	Q	D	D	M	K	V	I	G	V	S	K	T	R	P	D	F	E	A	R	M	A	L	K	K	G	Y	D	L	Y	V	A	I	P	E	R	V	K	L	F	E	K	A	G	I	E	V	A	G	T	V	D	D	M	L	D	E	A
Template Known Secondary structure										.		S	T	T											S	T	T									S	S		S									T	T						S	S	G	G	G							T	T													T
Template Predicted Secondary structure										.
Template SS confidence
		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	K	R	I	I	F	P	S	T
Query Conservation
Alig confidence								.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	V	I	D	C	.	.	.	T	P	E	G	I	G	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	K	M	Y	K	E	K	G	I	K	A	I	F	Q	G	G
Template Known Secondary structure		S						.	.	.			T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T							T	T
Template Predicted Secondary structure								.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.				.	.	.	.	90	.	.	.																.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions