Job Description P77398 Confidence 97.69% Date Thu Jan 5 12:28:36 GMT 2012 Rank 346 Aligned Residues 112 % Identity 17% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.								.	.	.	.	.	.	.	.	350	.	.	.											.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	.	.	.	.	.	.	.	E	V	Y	G	L	D	I	G	S	D	A	I	.	.	.	.	.	.	.	.	.	.	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W
Query Conservation																															.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Alig confidence																													.		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		K	T	P	M	R	V	A	V	T	G	A	A	G	Q	I	C	Y	S	L	L	F	R	I	A	N	G	D	.	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	D	C	A	F	P	L	L	A	G	M	T	A	H	A	D	P	M	T	A	F
Template Known Secondary structure											S	T	T	S												T	T	T	.	T	T		T	T											S																	T	T	T		T	T								S						T
Template Predicted Secondary structure																													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.				.	.	.	.	.	430	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		I	E	Y	H	V	K	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	.	K	R	I	I	F	P	S	T
Query Conservation																																																			.	.	.
Alig confidence		.	.	.	.	.													.	.																															.	.	.
Template Conservation		.	.	.	.	.													.	.
Template Sequence		.	.	.	.	.	K	D	A	D	V	A	L	L	V	G	A	R	.	.	P	R	G	P	G	M	E	R	K	D	L	L	E	A	N	A	Q	I	F	T	V	Q	G	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G	N
Template Known Secondary structure		.	.	.	.	.	T	T		S									.	.				T	T																									S		T	T							S	S
Template Predicted Secondary structure		.	.	.	.	.													.	.
Template SS confidence
							82	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions