Email l.a.kelley@imperial.ac.uk Description P0A8S5 Date Thu Jan 5 11:08:37 GMT 2012 Unique Job ID 02ba0b834fa5278e

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1u58a2 31.8 27 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 2 c2k21A_ 26.4 18 PDB header:membrane protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c 3 c2kncA_ 25.2 30 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 4 c1tz5A_ 21.2 54 PDB header:hormone/growth factor Chain: A: PDB Molecule:chimera of pancreatic hormone and neuropeptide y; PDBTitle: [pnpy19-23]-hpp bound to dpc micelles 5 c2bf9A_ 19.3 23 PDB header:hormone Chain: A: PDB Molecule:pancreatic hormone; PDBTitle: anisotropic refinement of avian (turkey) pancreatic2 polypeptide at 0.99 angstroms resolution. 6 d1qx8a_ 18.9 45 Fold:ROP-like Superfamily:ROP protein Family:ROP protein 7 d1rh5b_ 18.0 33 Fold:Single transmembrane helix Superfamily:Preprotein translocase SecE subunit Family:Preprotein translocase SecE subunit 8 d1f4na_ 17.6 55 Fold:ROP-like Superfamily:ROP protein Family:ROP protein 9 d1gtoa_ 17.3 45 Fold:ROP-like Superfamily:ROP protein Family:ROP protein 10 d2ijka1 17.1 45 Fold:ROP-like Superfamily:ROP protein Family:ROP protein 11 d1nkda_ 16.7 38 Fold:ROP-like Superfamily:ROP protein Family:ROP protein 12 d2akza2 16.5 23 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 13 c2dezA_ 15.6 46 PDB header:neuropeptide Chain: A: PDB Molecule:peptide yy; PDBTitle: structure of human pyy 14 c2rrhA_ 14.9 27 PDB header:hormone Chain: A: PDB Molecule:vip peptides; PDBTitle: nmr structure of vasoactive intestinal peptide in methanol 15 d1f4nb_ 14.3 55 Fold:ROP-like Superfamily:ROP protein Family:ROP protein 16 c1ronA_ 14.0 54 PDB header:neuropeptide Chain: A: PDB Molecule:neuropeptide y; PDBTitle: nmr solution structure of human neuropeptide y 17 c2d2pA_ 13.8 27 PDB header:hormone/growth factor Chain: A: PDB Molecule:pituitary adenylate cyclase activating PDBTitle: the solution structure of micelle-bound peptide 18 d2al1a2 13.7 27 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 19 c2k1aA_ 13.6 30 PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: bicelle-embedded integrin alpha(iib) transmembrane segment 20 d1pdza2 12.5 32 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 21 d2fyma2 not modelled 11.3 18 Fold:Enolase N-terminal domain-like Superfamily:Enolase N-terminal domain-like Family:Enolase N-terminal domain-like 22 c2l9uA_ not modelled 10.5 31 PDB header:membrane protein Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: spatial structure of dimeric erbb3 transmembrane domain 23 c2zklA_ not modelled 9.4 22 PDB header:isomerase Chain: A: PDB Molecule:capsular polysaccharide synthesis enzyme cap5f; PDBTitle: crystal structure of capsular polysaccharide assembling protein capf2 from staphylococcus aureus 24 d1kf6d_ not modelled 8.9 21 Fold:Heme-binding four-helical bundle Superfamily:Fumarate reductase respiratory complex transmembrane subunits Family:Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) 25 d1wira_ not modelled 8.5 18 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:variant C2H2 finger 26 c1yo7A_ not modelled 8.1 45 PDB header:replication regulator Chain: A: PDB Molecule:regulatory protein rop; PDBTitle: re-engineering topology of the homodimeric rop protein into2 a single-chain 4-helix bundle 27 d1r8ha_ not modelled 7.3 14 Fold:Ferredoxin-like Superfamily:Viral DNA-binding domain Family:Viral DNA-binding domain 28 c2eg9B_ not modelled 6.9 45 PDB header:hydrolase Chain: B: PDB Molecule:adp-ribosyl cyclase 1; PDBTitle: crystal structure of the truncated extracellular domain of2 mouse cd38 29 d1bboa2 not modelled 6.8 25 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 30 d1q15a2 not modelled 6.2 11 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Class II glutamine amidotransferases 31 d2i9wa2 not modelled 6.1 100 Fold:Sec-C motif Superfamily:Sec-C motif Family:Sec-C motif 32 d1vr3a1 not modelled 5.8 26 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Acireductone dioxygenase 33 c2zkrp_ not modelled 5.6 33 PDB header:ribosomal protein/rna Chain: P: PDB Molecule:rna expansion segment es31 part i; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 34 d4znfa_ not modelled 5.4 25 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 35 c3znfA_ not modelled 5.4 25 PDB header:zinc finger dna binding domain Chain: A: PDB Molecule:zinc finger; PDBTitle: high-resolution three-dimensional structure of a single2 zinc finger from a human enhancer binding protein in3 solution 36 c4znfA_ not modelled 5.4 25 PDB header:zinc finger dna binding domain Chain: A: PDB Molecule:zinc finger; PDBTitle: high-resolution three-dimensional structure of a single2 zinc finger from a human enhancer binding protein in3 solution 37 d1fftb2 not modelled 5.4 19 Fold:Transmembrane helix hairpin Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region Family:Cytochrome c oxidase subunit II-like, transmembrane region 38 d1vfsa1 not modelled 5.2 27 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Alanine racemase 39 c1hymB_ not modelled 5.2 83 PDB header:hydrolase (serine proteinase) Chain: B: PDB Molecule:hydrolyzed cucurbita maxima trypsin inhibitor v; PDBTitle: hydrolyzed trypsin inhibitor (cmti-v, minimized average nmr2 structure)