Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence99.40%DateThu Jan 5 11:37:18 GMT 2012
Rank74Aligned Residues219
% Identity15%Templated1sxjd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   377..380.........390.........400.........410.........420....... ..430.........440.........450..
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Query Sequence  EFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSG. . . . RNNRRMVKMNCAAMPAGLLESDLFG
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Template Sequence  NLDEVTAQDHAVTVLKKTLKS. . ANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKN
Template Known Secondary structure  STTT

S

TTTT
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STTSSTTS
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TT
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   35....40.........50..... ....60.........70.........80.........90.........100.........110..
 
   453......460.........470.........480.........490.........500.........510.........520.........530..
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Query Sequence  HERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADR
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Template Sequence  FARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYS. . . . . . . . . . . GVTRFCLICNY. . . . . . . VT
Template Known Secondary structure  S





TTS


S
TTGGGS
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   113......120.........130.........140.........150.........160. ........170.. ..
 
   533......540.........550.........560.........570.........580.........590.........600.........610..
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Query Sequence  EFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLT
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Template Sequence  RIIDPLASQCSKFRFKALDASN. . . . . . . . AIDRLRFISEQENVK. . . CDDGVLERILDI. SAGDLRRGITLLQSASKGA
Template Known Secondary structure  GS
S




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   175....180.........190...... ...200.........210. ........220... ......230.........240..
 
   613......620.......
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Query Sequence  . . . . RGNVLQLSLPDIVLP
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Template Sequence  QYLGDGKNITSTQVEELAG
Template Known Secondary structure 
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   243......250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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