Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence96.64%DateThu Jan 5 11:37:18 GMT 2012
Rank149Aligned Residues137
% Identity18%Templated1svma_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.94

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   380.........390.........400.........410.........420.........430.........440.........450.........
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  EIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFT
Query Conservation   


 
             
    



 

 



   
  

  
         
 
           
 
       
Alig confidence 













































...





















.........
Template Conservation              

  
   


      


  


     
   ...  
 




 




 
 
   .........
Template Sequence  LLPKMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLEL. . . CGGKALNVNLPLDRLNFELGVA. . . . . . . . .
Template Known Secondary structure  TSTT

TT


STTSS...



SS
TTTGGG.........
Template Predicted Secondary structure 















...









.........
Template SS confidence 















































































   397..400.........410.........420.........430.........440.. .......450.........460....
 
   460.........470....... ..480.........490.........500.........510....... ..520.........530.....
Predicted Secondary structure 











.













...








Query SS confidence 

















.







































. . .

















Query Sequence  GASAQRIGRFELADKSSL. FLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRL. . . IAATNRDLKKMVADREFR
Query Conservation              
  


. 
  
  
    
  
   
                  
 ...
      
          
Alig confidence  ..















.







































...





............
Template Conservation  .. 
    

 
         
   
     

 


 


        

      
 



 



............
Template Sequence  . . IDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNE. . . . . . . . . . . .
Template Known Secondary structure  ..TT
S
TT


STTTTTT



STT
SS


SSS






S............
Template Predicted Secondary structure  ..


































............
Template SS confidence 















































































   465....470.........480.........490.........500.........510.........520.........530
 
   536...540.........550...
Predicted Secondary structure 






Query SS confidence 

















Query Sequence  SDLYYRLNVFPIHLPPLR
Query Conservation    
   
    
 




Alig confidence  ...........






Template Conservation  ........... 
 
 
 
Template Sequence  . . . . . . . . . . . YSVPKTL
Template Known Secondary structure  ...........



Template Predicted Secondary structure  ...........

Template SS confidence 

















   531......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions