Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence98.92%DateThu Jan 5 11:37:18 GMT 2012
Rank113Aligned Residues207
% Identity20%Templated1r6bx2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   376...380.........390.........400.........410.........420..... ....430.........440........
Predicted Secondary structure 





















.......











Query SS confidence 

















































. . . . . . .






















Query Sequence  SEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNL. . . . . . . SGRNNRRMVKMNCAAMPAGLLES
Query Conservation       


 
             
    



 

 



   
  

  .......
         
 
          
Alig confidence 




















..


























.......
















......
Template Conservation     
 



   
  
   
 ..      


 







  
  

  
                       ......
Template Sequence  GGIDPLIGREKELERAIQVLC. . RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGAGT. . . . . .
Template Known Secondary structure  T
S



S
T..SSSS


TTSST
S
GGGTT







......
Template Predicted Secondary structure 








..























......
Template SS confidence 















































































   183......190.........200... ......210.........220.........230.........240.........250....
 
   449450.........460.........470.........480...... ...490.........500.........510.........520
Predicted Secondary structure 























........










Query SS confidence 





































. . . . . . . .

































Query Sequence  DLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMP. . . . . . . . LELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAA
Query Conservation   
 
                   
  


 
  
  
 ........   
  
   
                  
 
  
Alig confidence  ....

































........














............






Template Conservation  ....                       

 


   
                
       ............    
  
Template Sequence  . . . . KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG. . . . . . . . . . . . KIRVIGS
Template Known Secondary structure  ....

SS
SSSS
TTTTTTTTS

SSS
SS
SSS
............

Template Predicted Secondary structure  ....


















............

Template SS confidence 















































































   258.260.........270.........280.........290.........300.........310.... .....320.
 
   521........530.........540.........550.........560.........570.........580.........590. .
Predicted Secondary structure 


























........
Query SS confidence 






































































. . . . . . . .
Query Sequence  TNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSN. . . . . . . . M
Query Conservation      
            
   
    
 






 


  
    
                 
   
  ........
Alig confidence 

..














































.......












........
Template Conservation    ..               
    
            

            .......  
       
  

       
Template Sequence  TT. . YQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD. . . . . . . VRYTAKAVRAAVELAVKYINDR
Template Known Secondary structure 
..




TTSSGGG




T.......




TTS
Template Predicted Secondary structure  ..















.......









Template SS confidence 















































































   322. ......330.........340.........350.........360.........370 .........380.........390..
 
   593.... ..600.........610.....
Predicted Secondary structure 




.



Query SS confidence 




.

















Query Sequence  EWPGN. VRELENVIERAVLLTRGN
Query Conservation   



.  

   
          
Alig confidence 




.

















Template Conservation       

 

  
           
Template Sequence  HLPDKAIDVIDEAGARARLMPVSK
Template Known Secondary structure 
TTSSS

Template Predicted Secondary structure 



Template SS confidence 























   393......400.........410......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions