Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence99.04%DateThu Jan 5 11:37:18 GMT 2012
Rank100Aligned Residues171
% Identity22%Templated1qvra2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   375....380.........390.........400.........410.........420.........430.........440.........450....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  DSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHE
Query Conservation        


 
             
    



 

 



   
  

  
         
 
           
 
  
Alig confidence 






















..

























..........


















Template Conservation          

   
  
   
  ..      

 

 
 


 

  

  ..........                   
Template Sequence  EGKLDPVIGRDEEIRRVIQILLR. . RTKNNPVLIGEPGVGKTAIVEGLAQR. . . . . . . . . . IVKGDVPEGLKGKRIVSLQ
Template Known Secondary structure  TT
S



S

..SS




TTS
..........T
S
TTSTT

Template Predicted Secondary structure 










..










..........







Template SS confidence 















































































   166...170.........180........ .190.........200.........210.... .....220.........230...
 
   455....460.........470.........480.........490.........500.........510.........520.........530....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  RGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREF
Query Conservation                   
  


 
  
  
    
  
   
                  
 
      
         
Alig confidence 

































........................
















...

Template Conservation                       






      ........................     
           ...  
Template Sequence  MEFEERLKAVIQEVVQSQGEVILFIDELKPALAR. . . . . . . . . . . . . . . . . . . . . . . . GELRLIGATTLDEYREI. . . EK
Template Known Secondary structure 

TT
SS


T........................T



...TT
Template Predicted Secondary structure 











........................






...
Template SS confidence 















































































   234.....240.........250.........260....... ..270.........280.... ..
 
   535....540.........550.........560.........570.........580.........590.
Predicted Secondary structure 


















Query SS confidence 
























































Query Sequence  RSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSN
Query Conservation     
   
    
 






 


  
    
                 
   
  
Alig confidence 




































.......












Template Conservation     
      
 
          

            .......      

     
Template Sequence  DPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHG. . . . . . . VRISDSAIIAAAT
Template Known Secondary structure 
TTT
S







TT.......

Template Predicted Secondary structure 









.......



Template SS confidence 
























































   317..320.........330.........340.........350... ......360......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions