Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence99.57%DateThu Jan 5 11:37:18 GMT 2012
Rank58Aligned Residues232
% Identity22%Templated1g8pa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   373......380.........390.........400.........410.........420........ .430.........440...
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Query Sequence  NVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGR. . . . NNRRMVKMNCAAMPA. . . . .
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Template Sequence  RPVFPFSAIVGQEDMKLAL. . LLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVL
Template Known Secondary structure 




GGGS
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GGG



GGG
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TT

SSGGGS
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   18.20.........30...... ...40.........50.........60.........70.........80.........90.....
 
   444.....450... ......460.........470.........480.........490.........500....
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Query Sequence  . . . . . . . . . . . . . . . . GLLESDLFGH. . . ERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFER
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Template Sequence  STNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVV
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GGG

TTTTGGGS
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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   505....510.........520.........530.........540.........550. ........560........
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Query Sequence  . . LGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPP. LRERPEDIPLLAKAFTF. . . . . . . . . . . . .
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Template Sequence  ERDGLSIRHPARFVLVGSGNPE. . . . . . EGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKD
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TT




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   176...180.........190....... ..200.........210.........220.........230.........240.........
 
   569570.........580.........590....... ..600.........610..
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Query Sequence  . . . . . . KIARRLGRNIDSIPAETLRTLSNMEWPGN. . . VRELENVIERAVLLT
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Template Conservation           
                
          
 
    

  
   
Template Sequence  MDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALA
Template Known Secondary structure  GGG
B

SSS
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   250.........260.........270.........280.........290.........300..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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