Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence99.49%DateThu Jan 5 11:37:18 GMT 2012
Rank62Aligned Residues224
% Identity18%Templated1g41a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GEIIGRSEAMYSVLKQVEMVA. . . . . . . . . . . . QSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMP. . . .
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Template Sequence  QHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA. . . NAPFIKVEATKFTVGKE
Template Known Secondary structure  TT

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   15....20.........30.........40.........50.........60.........70.... .....80.........90.
 
   443......450.........460.... .....470.........480........ .490.
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Query Sequence  . . . . . . . . . . . . . . . . . . AGLLESDLFGHERGAFTGASAQ. RIGRFELADKSSLFLDEVGDMPLE. . . . . . . . . . . . LQP
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Template Sequence  VDSIIRDLTDSAMKLVRQQEIAKNRLIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQR
Template Known Secondary structure  TS



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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   492.......500.........510.........520.........530.........540.........550.........560.........570.
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Query Sequence  KLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIA
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Template Sequence  DLLPLVEGSTVSTKHGMVKTD. HILFIASGAFQVAR. . . PSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQY
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TT
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   281........290.........300. ........310..... ....320.........330.........340.........350......
 
   572. ......580.........590..... ....600.........
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Query Sequence  RR. . . LGRNIDSIPAETLRTLSNMEWP. . . . . . . GNVRELENVIERAV
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Template Sequence  KALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLM
Template Known Secondary structure  TTT

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   357..360.........370.........380.........390.........400....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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