Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence99.43%DateThu Jan 5 11:37:18 GMT 2012
Rank71Aligned Residues228
% Identity13%Templated1fnna2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   367..370.........380.........390.........400.. .......410.........420... ......430.........440.
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Query Sequence  LTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSD. . . . STVLILGETGTGKELIARAIH. NLSGRNNRRMVKMNCAAM
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Template Sequence  VDDSVFSPSYVPKRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIY
Template Known Secondary structure  S
GGGGSTT


S

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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   442.......450.........460......... 470.........480.........490.........500.........510..
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Query Sequence  PAGLLESDLFGHERGAFTGASAQRIGRF. . . . . . . . . ELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQ
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Template Sequence  RNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEAD. . . . . . . KLGA
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STT



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   84.....90.........100.........110.........120.........130.........140.........150.. ....
 
   513......520.........530.........540.........550.........560.........570.........580.........590.
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Query Sequence  TDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSN.
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Template Sequence  FRIALVIVGHNDAVLN. . . . NLDPSTRGIMGKYVIRFSPYTK. . DQIFDILLDRAKAGLAEGS. . . . . YSEDILQMIADI
Template Known Secondary structure 

SST....TS
TT




B..B
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   157..160.........170.. .......180.........190.... .....200.........210... ......220.....
 
   592.......600.........610..
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Query Sequence  . . . . . . . MEWPGNVRELENVIERAVLLT
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Template Sequence  TGAQTPLDTNRGDARLAIDILYRSAYAA
Template Known Secondary structure  SBSSTT
TTS

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   226...230.........240.........250...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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