Job Description P19323 Confidence 97.97% Date Thu Jan 5 11:37:18 GMT 2012 Rank 138 Aligned Residues 221 % Identity 10% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

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		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.			.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.						.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.						.	.	.	.	.
Predicted Secondary structure																				.	.																												.	.	.	.	.																			.	.	.	.	.
Query SS confidence																				.	.																												.	.	.	.	.																			.	.	.	.	.
Query Sequence		I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	V	.	.	A	Q	S	D	S	T	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	H	N	L	.	.	.	.	.	S	G	R	N	N	R	R	M	V	K	M	N	C	A	A	M	P	A	.	.	.	.	.	G	L	L	E	S
Query Conservation																				.	.																												.	.	.	.	.																			.	.	.	.	.
Alig confidence																				.	.																												.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		L	K	S	Q	V	E	D	F	T	R	I	F	L	P	I	Y	D	S	L	X	S	S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X	D	A	L	Y	E	K	I	W	F
Template Known Secondary structure																						T	T												S																	T	T	T	T	T	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.			.	.	.	480	.	.	.	.	.		.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure																														.	.										.
Query SS confidence																														.	.										.
Query Sequence		D	L	F	G	H	E	R	G	A	F	T	G	A	S	A	Q	R	I	G	R	F	E	L	A	D	K	S	S	.	.	L	F	L	D	E	V	G	D	M	.	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R	L	G	S	N	K	I	I	Q	T	D	V	R	L	I	A	A	T	N	R	D	L
Query Conservation																														.	.										.
Alig confidence																														.	.										.																.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		A	I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	S	S	K	.	.	.	.	.	.	.	.	.	.	.	N	S	K	L	S	I	I	C	V	G	G	H	.	.
Template Known Secondary structure				S																		S		G	G	G	S											S	S	S			T													S	.	.	.	.	.	.	.	.	.	.	.	S											S	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.												.	.	.	.	690	.	.	.	.	.	.	.
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.																					.	.	580	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	M	V	A	D	R	E	F	R	S	D	L	Y	Y	R	L	N	V	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	S	I	P	A	E	T
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																						.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																						.	.
Template Sequence		N	V	T	I	R	.	E	Q	I	N	I	X	P	S	L	K	A	H	F	T	E	I	K	L	N	K	V	.	.	D	K	N	E	L	Q	Q	X	I	I	T	R	L	K	S	L	L	K	P	F	H	V	K	V	N	D	K	K	E	X	T	I	Y	N	N	I	P	D	N	V	I	V	I	N	H	K	I	N	N	K	I
Template Known Secondary structure		S					.					T						T	T										.	.																										T	T											T	T
Template Predicted Secondary structure							.																						.	.
Template SS confidence
		700	.	.	.	.		.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.			.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
		586	.	.	.	590	.	.	.	.			.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		L	R	T	L	S	N	M	E	W	.	.	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T	R	G	N	V	L
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		T	Q	L	I	A	K	N	V	A	N	V	S	G	S	T	E	K	A	F	K	I	C	E	A	A	V	E	I	S	K	K	D	F	V
Template Known Secondary structure															S
Template Predicted Secondary structure
Template SS confidence
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions