Job Description P19323 Confidence 96.92% Date Thu Jan 5 11:37:18 GMT 2012 Rank 147 Aligned Residues 202 % Identity 16% Template c3qmzA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain Resolution 6.00 Å

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		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	F	G	E	I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	V	A	Q	S	D	S	T	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	H	N	L	S	G	R	N	N	R	R	M	V	K	M	N	C	A	A	M	P	A	G	L	L	E	S	D	L	F	G	H	E	R
Query Conservation
Alig confidence																																																.	.	.																												.	.	.	.
Template Conservation																																																.	.	.																												.	.	.	.
Template Sequence		L	N	S	V	F	I	S	Q	S	G	Y	L	L	L	I	G	F	A	T	L	T	D	S	L	H	Q	K	Y	G	G	C	F	F	G	P	A	G	T	G	K	T	E	T	V	K	A	.	.	.	F	G	Q	N	L	G	R	V	V	V	V	F	N	C	D	D	S	F	D	Y	Q	V	L	S	R	L	L	.	.	.	.
Template Known Secondary structure							S	S																			T	T	T	T							T	T	S	S								.	.	.		T	S	S											S	S	S	S		S								.	.	.	.
Template Predicted Secondary structure																																																.	.	.																												.	.	.	.
Template SS confidence
		1744	.	.	.	.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.				1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.		.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.										.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure																							.																						.	.	.	.	.	.	.	.	.
Query SS confidence																							.																						.	.	.	.	.	.	.	.	.
Query Sequence		G	A	F	T	G	A	S	A	Q	R	I	G	R	F	E	L	A	D	K	S	S	.	L	F	L	D	E	V	G	D	M	P	L	E	L	Q	P	K	L	L	R	V	L	.	.	.	.	.	.	.	.	.	Q	E	Q	E	F	E	R	L	G	S	N	K	I	I	Q	T	D	V	R	L	I	A	A	T	N	R	D	L
Query Conservation																							.																						.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.									.																						.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																																.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	I	T	Q	I	G	A	W	G	C	F	D	E	F	N	R	L	D	E	K	V	L	S	A	V	S	A	N	I	Q	Q	I	Q	N	G	L	Q	V	G	K	S	H	I	T	L	L	E	E	E	T	P	L	S	P	H	T	A	V	F	I	T	L	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.					T	T								T	T	T	T	S	S																	T	S	T	T	S	S	S						S	S															.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																																.	.	.	.
Template SS confidence
															1836	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.				.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		K	K	M	V	A	D	R	E	F	R	S	D	L	Y	Y	R	L	N	V	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	I	D	S	I	P	A	E	T	L	R	T	L	S	N	.	.	.	M	E	W	P	G	N	V	R	E	L	E
Query Conservation																																																																				.	.	.
Alig confidence		.	.	.	.	.	.	.	.															.					.														.	.																								.	.	.					.	.
Template Conservation		.	.	.	.	.	.	.	.															.					.														.	.																															.	.
Template Sequence		.	.	.	.	.	.	.	.	L	P	E	N	L	K	K	S	F	R	E	F	S	M	.	K	S	Q	S	.	G	T	I	A	E	M	I	L	Q	I	M	G	F	.	.	E	D	S	K	S	L	A	S	K	I	V	H	F	L	E	L	L	S	S	K	C	S	S	M	N	H	Y	H	F	G	.	.	L	R	T	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.							T	T	T						.					.													T	.	.	S	S																					S	S	S						.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.															.					.														.	.																															.	.
Template SS confidence
										1908	.	1910	.	.	.	.	.	.	.	.	.	1920	.		.	.	.	.		.	.	.	.	1930	.	.	.	.	.	.	.	.			.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.			.	1970	.	.	.
		603	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	I	E	R	A	V	L	L	T	R	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	L	R	N	C	S	P	L	I	S	E	F
Template Known Secondary structure														S
Template Predicted Secondary structure
Template SS confidence
		1975	.	.	.	.	1980	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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