Job Description P19323 Confidence 99.73% Date Thu Jan 5 11:37:18 GMT 2012 Rank 39 Aligned Residues 241 % Identity 20% Template c3pvsA_ PDB info PDB header:recombination Chain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa Resolution 2.50 Å

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		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		E	F	G	E	I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	V	A	Q	S	D	S	T	.	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	H	N	L	S	G	R	N	N	R	R	M	V	K	M	N	C	A	A	M	P	A	G	L	L	E	S	D	L	F	G	H	E	R
Query Conservation																														.
Alig confidence																														.																						.	.	.																							.	.	.	.	.
Template Conservation																																																				.	.	.																							.	.	.	.	.
Template Sequence		N	L	A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	.	.	.	A	N	A	D	V	E	R	I	S	A	V	T	S	G	V	K	E	I	R	E	A	I	.	.	.	.	.
Template Known Secondary structure		S	T	T	T			S						S	T	T	S									T										S	T	T	S	S												.	.	.	T	T								T	T	T											.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.																							.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	F	T	G	A	S	A	Q	R	I	G	R	F	E	L	A	D	K	S	S	L	F	L	D	E	V	G	D	M	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R	L	G	S	N	K	I	I	Q	T	D	V	R	L	I	A	A	T	N	R	D	L	K	K	M	V	A	D	R	E	F	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.																									.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																									.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	A	.	.	.	.	.	.	F	L	P	H	I	E	D	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	F	I	G	A	T	T	E	N	P	.	.	.	.	.	S	F	E	L	N
Template Known Secondary structure		.	.	.	.	.	.	.									T	T									T	T	T				.	.	.	.	.	.							T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S		G	.	.	.	.	.	G	G	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																									.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template SS confidence
									96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.														.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	Y	Y	R	L	N	V	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	I	D	S	I	P	A	E	T	L	R	T	L	S	N	M	E	W	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T	R	G	N
Query Conservation
Alig confidence																		.	.	.	.																																							.
Template Conservation																		.	.	.	.																																							.
Template Sequence		S	A	L	L	S	R	A	R	V	Y	L	L	K	S	L	S	.	.	.	.	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D	I	V	L	P	D	E	T	R	R	A	I	A	E	L	V	.	N	G	D	A	R	R	A	L	N	T	L	E	M	M	A	D	M	A	E	V	D
Template Known Secondary structure						T	T											.	.	.	.															T	T	T	S	S	T	T	S	S																.		S																S		B
Template Predicted Secondary structure																		.	.	.	.																																							.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	Q	L	S	L	P	D	I	V	L	P	E	P	E	T	P	P	A	A	T	V	V	A	L	E	G	E	D	E	Y	Q	L	I	V	R	V	L	K	E	T	N	G	V	V	A	G	P	K	G	A	A
Query Conservation
Alig confidence																									.	.	.																		.	.	.
Template Conservation																									.	.	.																		.	.	.
Template Sequence		D	S	G	K	R	V	L	K	P	E	L	L	T	E	I	A	G	E	R	S	A	R	K	.	.	.	G	D	R	F	Y	D	L	I	S	A	L	H	K	S	V	R	G	.	.	.	S	A	P	D	A	A
Template Known Secondary structure		T	T	S														T							.	.	.																	T	.	.	.	T
Template Predicted Secondary structure																									.	.	.																		.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions