Job Description P19323 Confidence 99.72% Date Thu Jan 5 11:37:18 GMT 2012 Rank 42 Aligned Residues 142 % Identity 17% Template c3o5yA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:sensor protein; PDBTitle: the crystal structure of the gaf domain of a two-component sensor2 histidine kinase from bacillus halodurans to 2.45a Resolution 2.45 Å

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		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	M	D	E	L	V	S	E	V	A	K	E	I	H	Y	Y	F	D	I	D	D	I	S	I	V	L	R	S	H	R	K	N	K	L	N	I	Y	S	T	H	Y	L	D	K	Q	H	P	A	H	E	Q	S	E	V	D	E	A	G	T	L	T	E	R	V	F	K	S	K	E	M	L	L	I	N	L	H	E	R	D
Query Conservation
Alig confidence																																									.	.	.
Template Conservation																																									.	.	.
Template Sequence		X	S	L	D	D	I	I	N	N	X	I	D	K	L	K	L	L	V	H	F	D	R	I	S	F	L	L	L	A	N	E	T	L	K	L	S	H	V	Y	.	.	.	P	K	G	S	H	S	L	D	I	G	S	T	I	P	K	E	Q	S	L	Y	W	S	A	L	D	Q	R	Q	T	I	F	R	S	L	T	D	T	Q
Template Known Secondary structure																			S			S									T	T									.	.	.	S	T	T			S	S		T	T					S	T	T										T	S						S			T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	P	Y	E	R	M	L	F	D	T	W	G	N	Q	I	Q	T	L	C	L	L	P	L	M	S	G	D	T	M	L	G	V	L	K	L	A	Q	C	E	E	K	V	F	T	T	T	N	L	N	L	L	R	Q	I	A	E	R	V	A	I	A	V	D	N	A	L
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		D	N	F	Y	E	K	Q	Y	L	A	I	.	.	.	L	D	L	K	S	I	L	V	I	P	I	Y	S	K	N	K	R	V	G	V	L	S	I	G	R	K	Q	Q	I	D	W	S	L	D	D	L	A	F	L	E	Q	L	T	D	H	L	A	V	S	I	E	N	V	E
Template Known Secondary structure					T	T						T	.	.	.	T	T												S	S											S	S																									T	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions