Job Description P19323 Confidence 100.00% Date Thu Jan 5 11:37:18 GMT 2012 Rank 6 Aligned Residues 332 % Identity 13% Template c3mf0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cgmp-specific 3',5'-cyclic phosphodiesterase; PDBTitle: crystal structure of pde5a gaf domain (89-518) Resolution 3.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		Q	Q	G	L	F	D	I	T	R	T	L	L	Q	Q	P	D	L	A	S	L	C	E	A	L	S	Q	L	V	K	R	S	A	L	A	D	N	A	A	I	V	L	W	Q	A	Q	T	Q	R	A	S	Y	Y	A	S	.	.	.	.	.	.	.	.	R	E	K	D	T	P	I	K	Y	E	D	E	T	V	L	A	H	G
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	R	L	L	E	L	V	K	D	I	S	S	H	L	D	V	T	A	L	C	H	K	I	F	L	H	I	H	G	L	I	S	A	D	R	Y	S	L	F	L	V	C	E	D	S	S	N	D	K	F	L	I	S	R	L	F	D	V	A	E	G	S	T	L	E	E	V	S	N	N	C	I	R	L	E	W	N	K	G
Template Known Secondary structure														T																			S			S											T	T	S						B	S					S	S	S			S		S	S		S			B				T	T		S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		P	V	R	S	I	L	S	R	P	D	T	L	H	C	S	Y	E	E	F	C	E	T	W	P	Q	L	D	A	G	G	L	Y	P	K	F	G	H	Y	C	L	M	P	L	A	.	A	E	G	H	I	F	G	G	C	E	F	I	R	Y	D	D	R	P	W	S	E	K	E	F	N	R	L	Q	T	F	T	Q	I	V	S
Query Conservation																																														.
Alig confidence																																														.
Template Conservation
Template Sequence		I	V	G	H	V	A	A	L	G	E	P	L	N	I	K	D	A	Y	E	D	P	R	F	N	A	E	V	D	Q	I	T	G	Y	K	T	Q	S	I	L	C	M	P	I	K	N	H	R	E	E	V	V	G	V	A	Q	A	I	N	K	K	S	G	N	G	G	T	F	T	E	K	D	E	K	D	F	A	A	Y	L	A
Template Known Secondary structure																S		G	G	G		S	S			T							T														T	T											S				S	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	T	E	Q	I	Q	S	R	V	V	N	N	V	D	Y	E	L	L	C	R	E	R	D	N	F	R	I	L	V	A	I	T	N	A	V	L	S	R	L	D	M	D	E	L	V	S	E	V	A	K	E	I	H	Y	Y	F	D	I	D	D	I	S	I	V	L	R	S	H	R	K	N	K	L	N	I	Y	S	T	H
Query Conservation
Alig confidence																							.	.	.
Template Conservation																							.	.	.
Template Sequence		F	C	G	I	V	L	H	N	A	Q	L	Y	E	T	S	L	L	E	N	K	R	.	.	.	N	Q	V	L	L	D	L	A	S	L	I	F	E	E	Q	Q	S	L	E	V	I	L	K	K	I	A	A	T	I	I	S	F	M	Q	V	Q	K	C	T	I	F	I	V	D	E	D	C	S	D	S	F	S	S	V	F	H
Template Known Secondary structure																							.	.	.													T	T	T	T																		T		S									S	S	S	S	S	S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.											.	.
Query SS confidence																																																																				.	.											.	.
Query Sequence		Y	L	D	K	Q	H	P	A	H	E	Q	S	E	V	D	E	A	G	T	L	T	E	R	V	F	K	S	K	E	M	L	L	I	N	L	H	E	R	D	D	L	A	P	Y	E	R	M	L	F	D	T	W	G	N	Q	I	Q	T	L	C	L	L	P	L	M	S	.	.	G	D	T	M	L	G	V	L	K	L	.	.
Query Conservation																																																																				.	.											.	.
Alig confidence								.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.															.	.											.	.
Template Conservation								.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Sequence		M	E	C	E	E	L	.	.	.	.	.	.	E	K	S	I	N	Y	M	Y	A	Q	Y	V	K	N	T	M	E	P	L	N	I	P	D	V	S	K	D	K	R	F	P	.	.	.	.	.	.	.	.	.	W	Q	C	I	R	S	L	L	C	T	P	I	K	N	G	K	K	N	K	V	I	G	V	C	Q	L	V	N
Template Known Secondary structure				T	T	T	B	.	.	.	.	.	.						T											S					S		S	T	T		T	T	S		.	.	.	.	.	.	.	.	.															S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template SS confidence
		386	.	.	.	390	.							.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.										.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
						318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	A	Q	C	E	E	K	V	F	T	T	T	N	L	N	L	L	R	Q	I	A	E	R	V	A	I	A	V	D	N	A	L	A	Y	Q	E	I	H	R	L	K	E	R	L
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		K	M	E	E	N	T	G	K	V	K	P	F	N	R	N	D	E	Q	F	L	E	A	F	V	I	F	C	G	L	G	I	Q	N	T	Q	M	Y	E	A	V	E	R	A	M	A	K	R
Template Known Secondary structure					T	T	T																																							T	T
Template Predicted Secondary structure
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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