Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence87.93%DateThu Jan 5 11:37:18 GMT 2012
Rank400Aligned Residues49
% Identity16%Templatec3kx2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   388.390.........400.........410....... ..420.........430......
Predicted Secondary structure 











.






Query SS confidence 





























.


















Query Sequence  MYSVLKQVEMVAQSDSTVLILGETGTGKEL. IARAIHNLSGRNNRRMVKM
Query Conservation             
    



 

 



  . 
  

  
         
Alig confidence 





























.


















Template Conservation 
      

  
     


 
 






 

  

           

Template Sequence  VHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVA
Template Known Secondary structure  GGGG
S

TTSS
GGGGT
Template Predicted Secondary structure 














Template SS confidence 

















































   95....100.........110.........120.........130.........140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions