 |
Job Description | P19323 | Confidence | 87.93% | Date | Thu Jan 5 11:37:18 GMT 2012 |
Rank | 400 | Aligned Residues | 49 |
% Identity | 16% | Template | c3kx2A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna |
PDBTitle: crystal structure of prp43p in complex with adp
|
Resolution | 2.20 Å |
|
  |   |
388 | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | |
. | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Y | S | V | L | K | Q | V | E | M | V | A | Q | S | D | S | T | V | L | I | L | G | E | T | G | T | G | K | E | L | . |
I | A | R | A | I | H | N | L | S | G | R | N | N | R | R | M | V | K | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |
|
|   |
|
|
|
|   |   | . |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
V | H | A | Q | R | D | E | F | L | K | L | Y | Q | N | N | Q | I | M | V | F | V | G | E | T | G | S | G | K | T | T | Q | I | P | Q | F | V | L | F | D | E | M | P | H | L | E | N | T | Q | V | A |
Template Known Secondary structure |   |
G | G | G | G |  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | G | T |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|