Job Description P19323 Confidence 100.00% Date Thu Jan 5 11:37:18 GMT 2012 Rank 7 Aligned Residues 320 % Identity 13% Template c3ibjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cgmp-dependent 3',5'-cyclic phosphodiesterase; PDBTitle: x-ray structure of pde2a Resolution 3.02 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	Q	G	L	F	D	I	T	R	T	L	L	Q	Q	P	D	L	A	S	L	C	E	A	L	S	Q	L	V	K	R	S	A	L	A	D	N	A	A	I	V	L	W	Q	A	Q	T	Q	R	A	S	Y	Y	A	S	R	E	K	D	T	P	I	K	Y	E	D	E	T	V	L	A	H	G	P	V	R	S	I	L	S
Query Conservation
Alig confidence														.																																																	.	.	.
Template Conservation														.																																																	.	.	.
Template Sequence		R	D	R	K	I	L	Q	L	C	G	E	L	.	Y	D	L	D	A	S	S	L	Q	L	K	V	L	Q	Y	L	Q	Q	E	T	R	A	S	R	C	C	L	L	L	V	S	E	D	N	L	Q	L	S	C	K	V	I	G	D	K	V	L	G	.	.	.	E	E	V	S	F	P	L	T	G	C	L	G	Q	V	V	E
Template Known Secondary structure														.			S																	T	T											T	T	S	S								T	T					.	.	.									S	T	T	T	T
Template Predicted Secondary structure														.																																																	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																							.	.														.
Query SS confidence																																							.	.														.
Query Sequence		R	P	D	T	L	H	C	S	Y	E	E	F	C	E	T	W	P	Q	L	D	A	G	G	L	Y	P	K	F	G	H	Y	C	L	M	P	L	A	.	.	A	E	G	H	I	F	G	G	C	E	F	I	R	.	Y	D	D	R	P	W	S	E	K	E	F	N	R	L	Q	T	F	T	Q	I	V	S	V	V	T	E	Q
Query Conservation																																							.	.														.
Alig confidence																		.	.																				.	.														.
Template Conservation																		.	.
Template Sequence		D	K	K	S	I	Q	L	K	D	L	T	S	E	D	V	Q	.	.	Q	L	Q	S	M	L	G	C	E	L	Q	A	M	L	C	V	P	V	I	S	R	A	T	D	Q	V	V	A	L	A	C	A	F	N	K	L	E	G	D	L	F	T	D	E	D	E	H	V	I	Q	H	C	F	H	Y	T	S	T	V	L	T	S
Template Known Secondary structure								T	T	S			S					.	.								S			S										S	S	S		S											S	S	S					T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	S	R	V	V	N	N	V	D	Y	E	L	L	C	R	E	R	D	N	F	R	I	L	V	A	I	T	N	A	V	L	S	R	L	D	M	D	E	L	V	S	E	V	A	K	E	I	H	Y	Y	F	D	I	D	D	I	S	I	V	L	R	S	H	R	K	N	K	L	N	I	Y	S	T	H	Y	L	D	K	Q
Query Conservation
Alig confidence															.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	A	F	Q	K	E	Q	K	L	K	C	E	.	.	.	.	.	.	C	Q	A	L	L	Q	V	A	K	N	L	F	T	H	L	D	D	V	S	V	L	L	Q	E	I	I	T	E	A	R	N	L	S	N	A	E	I	C	S	V	F	L	L	D	Q	N	E	L	V	A	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T			.	.	.	.	.	.												G	G	G	T	T																		T											S	S	B				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.							.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.
Predicted Secondary structure																																																																.													.
Query SS confidence																																																																.													.
Query Sequence		H	P	A	H	E	Q	S	E	V	D	E	A	G	T	L	T	E	R	V	F	K	S	K	E	M	L	L	I	N	L	H	E	R	D	D	L	A	P	Y	E	R	M	L	F	D	T	W	G	N	Q	I	Q	T	L	C	L	L	P	L	M	S	G	.	D	T	M	L	G	V	L	K	L	A	Q	C	.	E	E	K	V
Query Conservation																																																																.													.
Alig confidence		.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.													.
Template Conservation		.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	K	V	S	Y	E	I	R	I	P	A	D	Q	G	I	A	G	H	V	A	T	T	G	Q	I	L	N	I	P	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	T	R	N	I	L	C	F	P	I	K	N	E	N	Q	E	V	I	G	V	A	E	L	V	N	K	I	N	G	P	W
Template Known Secondary structure		.									B	T	T	S											S					S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S	S	S												S	S	S	S	S
Template Predicted Secondary structure		.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.																		.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	T	T	N	L	N	L	L	R	Q	I	A	E	R	V	A	I	A	V	D	N	A	L	A	Y	Q	E	I	H	R	L	K	E	R	L	V	D	E	N	L	A	L	T	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	K	F	D	E	D	L	A	T	A	F	S	I	Y	C	G	I	S	I	A	H	S	L	L	Y	K	K	V	N	E	A	Q	Y	R	S	H	L	A	N	E	M	M	M	Y	H
Template Known Secondary structure				T	T	T	T																																						T	T
Template Predicted Secondary structure
Template SS confidence
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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