Job Description P19323 Confidence 99.01% Date Thu Jan 5 11:37:18 GMT 2012 Rank 103 Aligned Residues 209 % Identity 21% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.												400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	L	N	N	V	D	S	E	F	G	E	I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	V	A	.	.	.	.	.	.	.	.	.	.	.	Q	S	D	S	T	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	H	N	L	S	G	R	N	N	R	R	M	V	K	M	N
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		E	V	D	E	R	P	N	V	R	Y	E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	.	.	.	T	N	A	T	F	I	R	V	V
Template Known Secondary structure					S	S					G	G	G			S										T	T	T	T													T					S						S	S	S	S	S	S												.	.	.	T	T
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.												.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	A	A	M	P	A	G	L	L	E	S	D	L	F	G	H	E	R	G	A	F	T	G	A	S	A	Q	R	I	G	R	F	E	L	A	D	K	S	S	L	F	L	D	E	V	G	D	M	.	.	.	.	.	.	.	.	.	.	.	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R	L	G
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.																																																																	.	.	.	.	.
Template Sequence		G	S	.	.	.	.	.	.	.	.	.	E	L	V	K	K	F	I	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	M	D	.	.	.	.	.
Template Known Secondary structure		G	G	.	.	.	.	.	.	.	.	.	G	S				S	T	T	T	T	T													T		S								G	G	G	T	S	B			S	S	S				S	T														T	T	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																																																	.	.	.	.	.
Template SS confidence
		237	.										.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	K	I	I	Q	T	D	V	R	L	I	A	A	T	N	R	D	L	K	K	M	V	A	D	R	E	F	R	S	D	L	Y	Y	R	L	N	V	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	I	D	S	I	P	A	E	T	L
Query Conservation
Alig confidence		.																	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation		.																	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Sequence		.	G	F	D	A	R	G	D	V	K	I	I	G	A	T	N	R	.	.	.	.	.	.	.	P	D	I	L	D	P	A	I	L	R	P	G	R	F	D	R	I	I	E	V	P	A	P	D	E	K	G	.	.	.	.	.	.	.	.	.	R	L	E	I	L	K	I	H	T	R	K	M	N	L	A	E	D	V	N	L
Template Known Secondary structure		.	S	S		S	S	S	S								S	S	.	.	.	.	.	.	.	G	G	G	B						S	T	T	S															.	.	.	.	.	.	.	.	.								T	T	T	T	S		B		S	S
Template Predicted Secondary structure		.																	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template SS confidence
			303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.								.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.										.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		587	.	.	590	.	.	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		R	T	L	S	N	M	E	W	P	G	.	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T
Query Conservation												.
Alig confidence						.						.
Template Conservation						.
Template Sequence		E	E	I	A	.	K	M	T	E	G	C	V	G	A	E	L	K	A	I	C	T	E	A	G	M	N	A
Template Known Secondary structure						.	T	T	S	T	T
Template Predicted Secondary structure						.
Template SS confidence
		366	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions