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Job DescriptionP19323
Confidence99.29%DateThu Jan 5 11:37:18 GMT 2012
Rank78Aligned Residues203
% Identity19%Templatec3f9vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: crystal structure of a near full-length archaeal mcm: functional2 insights for an aaa+ hexameric helicase
Resolution4.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   400.........410.........420.........430.........440.........450.........460.........470.........
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Query Sequence  QSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFL
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Template Sequence  RGDIHILIIGDPGTAKSQMLQFISRVAPRA. . . VYTTGKGSTAAGLTAA. . . . VVREKGTGEYYLEAGALVLADGGIAVI
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   331........340.........350.........360 .........370...... ...380.........390.........400...
 
   480.........490.........500... ......510.........520.. .......530.........540.........550.
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Query Sequence  DEVGDMPLELQPKLLRVLQEQEFE. . RLGSNKIIQTDVRLIAATN. . . . . . RDLKKMVADREFRSDLYYRLNVFPIHLPP
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Template Sequence  DEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQ
Template Known Secondary structure  TTTT


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   404.....410.........420.........430.........440.........450.........460.........470.........480...
 
   552.......560... ......570.........580.........590.. .......
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Query Sequence  LRERPEDIPLLA. . . . . . . . . . . . . . . . . . KAFTFKIARRLGRNIDSIPAETLRTLSNM. . . . . . . . . . . . . . EWPGNVR
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Template Sequence  PGEQDRELANYILDVHSGKSTKNIIDIDTLRKYIAYARKYVTPK. . . ITSEAKNLITDFFVEMRKKSSETPDSPILITPR
Template Known Secondary structure  TTTT


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   484.....490.........500.........510.........520....... ..530.........540.........550.........560
 
   600.........610..
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Query Sequence  ELENVIERAVLLT
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Template Sequence  QLEALIRISEAYA
Template Known Secondary structure  TTT
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   561........570...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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