Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence90.06%DateThu Jan 5 11:37:18 GMT 2012
Rank349Aligned Residues44
% Identity20%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   405....410.........420.........430.........440........
Predicted Secondary structure 

















Query SS confidence 











































Query Sequence  VLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLES
Query Conservation 


 

 



   
  

  
         
 
          
Alig confidence 











































Template Conservation 
   
  
 




  


      
  
  
  
  
  
  
Template Sequence  IMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDTFRAGAIEQ
Template Known Secondary structure 

TTSSTT


TT
Template Predicted Secondary structure 
















Template SS confidence 











































   126...130.........140.........150.........160.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions