Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence86.55%DateThu Jan 5 11:37:18 GMT 2012
Rank436Aligned Residues44
% Identity14%Templatec3dm5A_
PDB info PDB header:rna binding protein, transport proteinChain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus.
Resolution2.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   405....410.........420.........430.........440........
Predicted Secondary structure 

















Query SS confidence 











































Query Sequence  VLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLES
Query Conservation 


 

 



   
  

  
         
 
          
Alig confidence 











































Template Conservation 
  

  
 




 



      
 

 

 


 
 

 

Template Sequence  LLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQ
Template Known Secondary structure 

TTSSTTT




SST
Template Predicted Secondary structure 














Template SS confidence 











































   103......110.........120.........130.........140......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions