Job Description P19323 Confidence 99.62% Date Thu Jan 5 11:37:18 GMT 2012 Rank 54 Aligned Residues 218 % Identity 15% Template c3bosA_ PDB info PDB header:hydrolase regulator,dna binding protein Chain: A: PDB Molecule:putative dna replication factor; PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution Resolution 1.75 Å

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		368	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		T	E	Q	L	N	N	V	D	S	E	F	G	E	.	I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	V	A	Q	S	D	S	T	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	H	N	L	S	G	R	N	N	R	R	M	V	K	M	N	C	A	A	M	P	A	G	L	L
Query Conservation															.
Alig confidence															.																	.	.
Template Conservation																																.	.
Template Sequence		L	P	V	H	L	P	D	D	E	T	F	T	S	Y	Y	P	G	N	D	E	L	I	G	A	L	K	S	A	A	S	.	.	G	D	G	V	Q	A	I	Y	L	W	G	P	V	K	S	G	R	T	H	L	I	H	A	A	C	A	R	A	N	E	L	E	R	R	S	F	Y	I	P	L	G	I	H	A	S	I	S	T
Template Known Secondary structure								T	T		S	T	T	T	S																	.	.	T		S		S							S	T	T	S	S															T	T								G	G	G	G	G	G	S		G
Template Predicted Secondary structure																																.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	D	L	F	G	H	E	R	G	A	F	T	G	A	S	A	Q	R	I	G	R	F	E	L	A	D	K	S	S	L	F	L	D	E	V	G	D	M	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R	L	G	S	N	K	I	I	Q	T	D	V	R	L	I	A	A	T	N	R	D	L	K
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	L	E	G	L	E	Q	F	D	L	I	C	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	D	V	D	A	V	A	G	H	P	L	W	E	E	A	I	F	D	L	Y	N	R	V	A	E	Q	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	L	I	V	S	A	S	A	S	P	X
Template Known Secondary structure		G	G	G	T	T	G	G	G	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.			T	G	G	G	G	T	T																				S	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S		T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.														.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.														.	.	140	.	.	.	.	.	.	.	.	.
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.		.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		K	M	V	A	D	R	E	F	R	S	D	L	Y	Y	R	L	N	.	V	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	I	D	S	I	P	A	E	T	L	R	T	L	S	N	M	E	W	P	G	N	V	R	E	L	E	N	V	I
Query Conservation																			.
Alig confidence			.	.	.														.												.	.	.	.	.	.	.	.	.																														.
Template Conservation			.	.	.																										.	.	.	.	.	.	.	.	.																														.
Template Sequence		E	.	.	.	A	G	F	V	L	P	D	L	V	S	R	X	H	W	G	L	T	Y	Q	L	Q	P	X	X	D	.	.	.	.	.	.	.	.	.	D	E	K	L	A	A	L	Q	R	R	A	A	X	R	G	L	Q	L	P	E	D	V	G	R	F	L	L	N	R	.	X	A	R	D	L	R	T	L	F	D	V	L
Template Known Secondary structure		T	.	.	.	T	T													S										G	.	.	.	.	.	.	.	.	.	G	G												T	T															.	T	T	T
Template Predicted Secondary structure			.	.	.																										.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.										.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.
		606	.	.	.	610	.	.			.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		E	R	A	V	L	L	T	.	.	R	G	N	V	L	Q	L	S	L	P	D	I	V	L
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		D	R	L	D	K	A	S	X	V	H	Q	R	K	L	T	I	P	F	V	K	E	X	L
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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