Job Description P19323 Confidence 99.12% Date Thu Jan 5 11:37:18 GMT 2012 Rank 93 Aligned Residues 194 % Identity 23% Template c3b9pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.											.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.
Query Sequence		E	F	G	E	I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	.	.	.	.	.	.	.	.	.	.	V	A	Q	S	D	S	T	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	H	N	L	S	G	R	N	N	R	R	M	V	K	M	N	C	A	A	M	P	A	G	L	L
Query Conservation																							.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.																														.	.	.											.	.	.	.	.	.	.
Template Conservation																																																														.	.	.											.	.	.	.	.	.	.
Template Sequence		E	W	T	D	I	A	G	Q	D	V	A	K	Q	A	L	Q	E	M	V	I	L	P	S	V	R	P	E	L	F	T	G	L	R	A	P	A	K	G	L	L	L	F	G	P	P	G	N	G	K	T	L	L	A	R	A	V	A	T	E	C	.	.	.	S	A	T	F	L	N	I	S	A	A	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G	S														T							G	G	G	S		G	G	G				S						S	S	S	S	S													T	.	.	.	T								S	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.											.	.	.	.	.	.	.
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540				.	.	.	.	.	.	.	.	.	550
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.							.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		E	S	D	L	F	G	H	E	R	G	A	F	T	G	A	S	A	Q	R	I	G	R	F	E	L	A	D	K	S	S	L	F	L	D	E	V	G	D	M	.	.	.	.	.	.	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R	L	G	S	N	K	I	I	Q	T	D	V	R	L	I	A	A
Query Conservation																																									.	.	.	.	.	.
Alig confidence		.	.																																						.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	S	L	T	S	K	Y	V	G	D	G	E	K	L	V	R	A	L	F	A	V	A	R	H	M	Q	P	S	I	I	F	I	D	E	V	D	S	L	L	S	E	R	E	A	S	R	R	L	K	T	E	F	L	V	E	F	D	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	R	I	V	V	L	A	A
Template Known Secondary structure		.	.	T	T	S	S	S	S		S																T		S							T	G	G	G	T	S	B					S																.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.													610	.	.	.	.	.	.
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		T	N	R	D	L	K	K	M	V	A	D	R	E	F	R	S	D	L	Y	Y	R	L	N	V	.	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	I	D	S	I	P	A	E	T	L	R	T	L	S	N	M	E	W	P	G	N	V	R
Query Conservation																										.
Alig confidence					.	.	.	.	.	.	.															.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	R	.	.	.	.	.	.	.	P	Q	E	L	D	E	A	A	L	R	R	F	T	K	R	V	Y	V	S	L	P	D	E	Q	T	R	E	L	L	L	N	R	L	L	.	.	.	.	.	.	.	.	.	.	.	Q	K	Q	G	S	P	L	D	T	E	A	L	R	R	L	A	K	I	T	D	G	Y	S	G	S
Template Known Secondary structure			S		.	.	.	.	.	.	.	G	G	G	B																															.	.	.	.	.	.	.	.	.	.	.	G	G	G	S			S												T	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		628	.	630								.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.												.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
		600	.	.	.	.	.	.	.	.	.	610	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	E	N	V	I	E	R	A	V	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	T	A	L	A	K	D	A	A	L	E	P
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		690	.	.	.	.	.	.	.	.	.	700	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions