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Job DescriptionP19323
Confidence98.90%DateThu Jan 5 11:37:18 GMT 2012
Rank116Aligned Residues200
% Identity17%Templatec2qz4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   374.....380.........390........ .400.........410.........420.........430.........440.........
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Query Sequence  VDSEFGEIIGRSEAMYSVLKQVEMV. . . . AQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESD
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Template Sequence  MGVSFKDVAGMHEAKLEVREFVDYLKSPEAKVPKGALLLGPPGCGKTLLAKAVATE. . . AQVPFLAMAGAEFVEVIGGLG
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TTSS...T

TTTTSSSSTT
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   304.....310.........320.........330.........340.........350......... 360.........370.........380
 
   450.........460.........470.........480.........490.........500.........510.........520.........
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Query Sequence  LFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMV
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Template Sequence  A. . . . . . . . . ARVRSLFKEARARAPCIVYIDEIEQTLNQLLVEMDGMGTTDH. . . . . . . . . . . . . VIVLASTNR. . ADIL
Template Known Secondary structure  .........T
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   387 ..390.........400.........410.........420......... 430........ .440..
 
   530.........540.........550.........560.........570.........580.........590.........600.........
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Query Sequence  ADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAV
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Template Sequence  DGALMRPGRLDR. . . . HVFIDLP. . TLQERREIFEQHLKSLKLTQS. . . . . . STFYSQRLAELTPGFSGADIANICNEAA
Template Known Secondary structure  GSGGGSTTS

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   462.......470... ......480 .........490.........500. ........510.........520.........
 
   610..
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Query Sequence  LLT
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Template Sequence  LHV
Template Known Secondary structure  T

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   530..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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