Job Description P19323 Confidence 98.94% Date Thu Jan 5 11:37:18 GMT 2012 Rank 108 Aligned Residues 227 % Identity 19% Template c2qbyB_ PDB info PDB header:replication/dna Chain: B: PDB Molecule:cell division control protein 6 homolog 3; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.			.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.									.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																																									.	.																			.	.	.	.	.	.	.	.
Query SS confidence																																									.	.																			.	.	.	.	.	.	.	.
Query Sequence		A	L	T	E	Q	L	N	N	V	D	S	E	F	G	E	I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	V	A	Q	S	D	S	T	.	.	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	.	.	.	.	.	.	.	.	H	N	L	S	G	R	N	N	R	R	M	V	K
Query Conservation																																									.	.																			.	.	.	.	.	.	.	.
Alig confidence																																									.	.																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	P	K	V	F	I	D	P	L	S	V	F	K	E	I	P	F	R	E	D	I	L	R	D	A	A	I	A	I	R	Y	F	V	K	N	E	V	K	F	S	N	L	F	L	G	L	T	G	T	G	K	T	F	V	S	K	Y	I	F	N	E	I	E	E	V	K	K	E	D	E	E	Y	K	D	V	K	Q	A	Y
Template Known Secondary structure				T	T	T	T	T							S	S		T	T																	T	T												T	T	S	S																			S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		436	.	.	.	440	.	.	.							.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470				.	.	.	.	.	.	.	.	.	480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.																												.	.	.															.
Query SS confidence										.	.	.	.	.	.																												.	.	.															.
Query Sequence		M	N	C	A	A	M	P	A	.	.	.	.	.	.	G	L	L	E	S	D	L	F	G	H	E	R	G	A	F	T	G	A	S	A	Q	R	I	G	R	F	E	.	.	.	L	A	D	K	S	S	L	F	L	D	E	V	G	D	.	M	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R	L
Query Conservation										.	.	.	.	.	.																												.	.	.															.
Alig confidence										.	.	.	.	.	.																												.	.	.															.																		.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		V	N	C	R	E	V	G	G	T	P	Q	A	V	L	S	S	L	A	G	K	L	T	G	F	S	V	P	K	H	G	I	N	L	G	E	Y	I	D	K	I	K	N	G	T	R	N	I	R	A	I	I	Y	L	D	E	V	D	T	L	V	K	R	R	G	G	D	I	V	L	Y	Q	L	L	R	S	D	.	.	.	.
Template Known Secondary structure									S																S				S	S	S	S		T												S	S	S								T	T						S	T	T	S									T	S	S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	N	K	I	I	Q	T	D	V	R	L	I	A	A	T	N	R	D	L	K	K	M	V	A	D	R	E	F	R	S	D	L	Y	Y	R	L	N	V	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	I	D	S	I	P	A	E	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.														.	.	.	.																.										.	.																				.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.														.	.	.	.																.										.	.																				.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	A	N	I	S	V	I	M	I	S	N	D	I	N	.	.	.	.	V	R	D	Y	M	E	P	R	V	L	S	S	L	G	P	.	S	V	I	F	K	P	Y	D	A	.	.	E	Q	L	K	F	I	L	S	K	Y	A	E	Y	G	L	I	K	G	T	.	.	.	.	.	Y	D	D	E	I
Template Known Secondary structure		.	.	.	.	.	.	.	S									S	S	T	T	.	.	.	.	T	T	T	T	S							T				.										.	.														T	S		T	T	S	.	.	.	.	.			S
Template Predicted Secondary structure		.	.	.	.	.	.	.														.	.	.	.																.										.	.																				.	.	.	.	.
Template SS confidence
									173	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.						.	230	.	.	.
		586	.	.	.			590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		L	R	T	L	.	.	S	N	M	E	W	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T	R	G	N
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		L	S	Y	I	A	A	I	S	A	K	E	H	G	D	A	R	K	A	V	N	L	L	F	R	A	A	Q	L	A	S	G	G
Template Known Secondary structure											T	T																		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions