Job Description P19323 Confidence 98.92% Date Thu Jan 5 11:37:18 GMT 2012 Rank 114 Aligned Residues 299 % Identity 10% Template c2qbyA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cell division control protein 6 homolog 1; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.			.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		L	T	E	Q	L	N	N	V	D	S	E	F	G	E	I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	V	A	Q	S	D	S	T	.	.	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	H	N	L	S	G	R	N	N	R	R	M	V	K	M	N	C	A	A	M	P	A	G
Query Conservation																																								.	.
Alig confidence																																								.	.
Template Conservation
Template Sequence		I	N	R	E	Y	L	L	P	D	Y	I	P	D	E	L	P	H	R	E	D	Q	I	R	K	I	A	S	I	L	A	P	L	Y	R	E	E	K	P	N	N	I	F	I	Y	G	L	T	G	T	G	K	T	A	V	V	K	F	V	L	S	K	L	H	K	K	F	L	G	K	F	K	H	V	Y	I	N	T	R	Q	I
Template Known Secondary structure		S		G	G	G	G	S	S	S				S			T	T											S	S	G	G	G	G	G	T												T	T	S	S																T		S	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.													.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	E	S	D	L	F	G	H	E	R	G	A	F	T	G	A	S	A	Q	R	I	G	.	.	.	.	.	.	.	.	.	.	.	.	R	F	E	L	A	D	K	S	S	L	F	L	D	E	V	G	D	M	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R	L	G	S	N	K	I	I	Q
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.
Template Sequence		D	T	P	Y	R	V	L	A	D	L	L	E	S	L	D	V	K	V	P	F	T	G	L	S	I	A	E	L	Y	R	R	L	V	K	A	V	R	D	Y	G	S	Q	V	V	I	V	L	D	E	I	D	A	F	V	K	K	Y	N	D	D	I	L	Y	K	L	S	R	I	N	.	.	.	.	.	.	.	S	E	V	N
Template Known Secondary structure			S									T	T	T	T	S					S	S	S																T			S								T							S	S		S	T										.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.								.	.	170	.
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		T	D	V	R	L	I	A	A	T	N	R	D	L	K	K	M	V	A	D	R	E	F	R	S	D	L	Y	Y	R	L	N	V	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	I	D	S	I	P	A	E	T	L	R	T	L	S	N	.
Query Conservation																																																																																	.
Alig confidence															.	.	.	.	.																								.	.																					.	.	.	.	.												.
Template Conservation															.	.	.	.	.																								.	.																					.	.	.	.	.
Template Sequence		K	I	S	F	I	G	I	T	N	D	V	K	F	.	.	.	.	.	V	D	L	L	D	P	R	V	K	S	S	L	S	E	E	E	I	I	F	P	P	Y	N	.	.	A	E	E	L	E	D	I	L	T	K	R	A	Q	M	A	F	K	P	G	V	.	.	.	.	.	L	P	D	N	V	I	K	L	C	A	A	L
Template Known Secondary structure										S		G	G	G	.	.	.	.	.	G	G	G		T	T					T	T	T	T										.	.																B		S	S		.	.	.	.	.	S
Template Predicted Secondary structure															.	.	.	.	.																								.	.																					.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.
			592	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.				.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure		.																						.	.	.
Query SS confidence		.																						.	.	.
Query Sequence		.	M	E	W	P	G	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T	.	.	.	R	G	N	V	L	Q	L	S	L	P	D	I	V	L	P	E	P	E	T	P	P	A	A	T	V	V	A	L	E	G	E	D	E	Y	Q	L	I	V	R	V	L	K	E	T	N	G	V	V	A	G	P	K	G	A	A
Query Conservation		.																						.	.	.
Alig confidence		.																						.	.	.
Template Conservation
Template Sequence		A	A	R	E	H	G	D	A	R	R	A	L	D	L	L	R	V	S	G	E	I	A	E	R	M	K	D	T	K	V	K	E	E	Y	V	Y	M	A	K	E	E	I	E	R	D	R	V	R	D	I	I	L	T	L	P	F	H	S	K	L	V	L	M	A	V	V	S	I	S	V	S	T	T	G	A	V	Y	E	T	Y
Template Known Secondary structure					T	T																				T	T		S	S																								T	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		668	.	670								.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.
Query Sequence		Q	R	L	.	.	.	.	.	.	.	G	L	K	R	T	T	L	L	S	R	M	K	R	L
Query Conservation					.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	I	C	K	K	L	G	V	E	A	V	T	Q	R	R	V	S	D	I	I	N	E	L
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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