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Job DescriptionP19323
Confidence99.00%DateThu Jan 5 11:37:18 GMT 2012
Rank104Aligned Residues159
% Identity18%Templatec2p65A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical protein pf08_0063; PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   376...380.........390.........400.........410.........420.........430.........440.........450.....
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Query Sequence  SEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHER
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Template Sequence  GKLDPVIGRDTEIRRAIQILSR. . RTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLDLSSLIAGAKYR
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Query Sequence  GAFTGASAQ. RIGRFELADKSSLFLDEVGDM. . . . . . . . . PLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDL
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Template Sequence  GDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARG. . . . . . . . . . . . . ELRCIGATTV. .
Template Known Secondary structure  TTTSTTGGGGSSSSSS
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   97..100.........110.........120.........130.........140.........150. ........160.
 
   526...530.........540.........550.
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Query Sequence  KKMVADREFRSDLYYRLNVFPIHLPP
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Template Sequence  SEYRQFIEKDKALERRFQQILVEQPS
Template Known Secondary structure  TTT


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   162.......170.........180.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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