Job Description P19323 Confidence 99.47% Date Thu Jan 5 11:37:18 GMT 2012 Rank 63 Aligned Residues 164 % Identity 11% Template c2o9bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:bacteriophytochrome; PDBTitle: crystal structure of bacteriophytochrome chromophore binding domain Resolution 2.15 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	I	L	V	A	I	T	N	A	V	L	S	R	L	D	M	D	E	L	V	S	E	V	A	K	E	I	H	Y	Y	F	D	I	D	D	I	S	I	V	L	R	S	H	R	K	N	K	L	N	I	Y	S	T	H	Y	L	D	K	Q	H	P	A	H	E	Q	S	E	V	D	E	A	G	T	L	T	E	R	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	H	A	L	R	N	A	M	F	A	L	E	S	A	P	N	L	R	A	L	A	E	V	A	T	Q	T	V	R	E	L	T	G	F	D	R	V	M	L	Y	K	F	A	P	D	A	T	G	E	V	I	A	E	A	R	R	E	G	L	H	A	F	L	G	H	R	F	P	A	S	D	I	P	A	Q	A	R	A	L	Y
Template Known Secondary structure																	S																			S									T	T	S											T	T	S				T	T					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.																							.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	K	E	M	L	L	I	N	L	H	E	R	D	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	Y	E	R	M	L	F	D	T	W	G	N	Q	I	Q	T	L	C	L	L	P	L	M	S	G	D	T	M	L	G	V	L	K	L	A	Q	C	E	E	K	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	H	L	L	R	L	T	A	D	T	R	A	A	A	V	P	L	D	P	V	L	N	P	Q	T	N	A	P	T	P	L	G	G	A	V	L	R	A	T	S	P	M	H	M	Q	Y	L	R	N	M	G	V	G	S	S	L	S	V	S	V	V	V	G	G	Q	L	W	G	L	I	A	C	H	H	Q	T	P	Y	V
Template Known Secondary structure		T	T	S						S		T	T								S	S			T	T	T	T						T	T		T	T	B													T	T		S										T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	T	T	N	L	N	L	L	R	Q	I	A	E	R	V	A	I	A	V	D	N	A	L	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	P	D	L	R	T	T	L	E	S	L	G	R	L	L	S	L	Q	V	Q	V	K	E	A	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions