Job Description P19323 Confidence 97.36% Date Thu Jan 5 11:37:18 GMT 2012 Rank 144 Aligned Residues 155 % Identity 19% Template c2gx5B_ PDB info PDB header:transcription Chain: B: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody; PDBTitle: n-terminal gaf domain of transcriptional pleiotropic repressor cody Resolution 1.74 Å

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		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	R	E	R	D	N	F	R	I	L	V	A	I	T	N	A	V	L	S	R	L	D	M	D	E	L	V	S	E	V	A	K	E	I	H	Y	Y	F	D	I	D	D	I	S	I	V	L	R	S	H	R	K	N	K	L	N	I	Y	S	T	H	Y	L	D	K	Q	H	P	A	H	E	Q	S	E	V	D	E	A	G
Query Conservation
Alig confidence																.	.	.																			.	.	.	.	.	.	.
Template Conservation																.	.	.																			.	.	.	.	.	.	.
Template Sequence		L	Q	K	T	R	I	I	N	S	M	L	Q	A	A	.	.	.	A	G	K	P	V	N	F	K	E	M	A	E	T	L	R	D	V	I	.	.	.	.	.	.	.	D	S	N	I	F	V	V	S	R	R	G	K	L	L	G	Y	S	I	N	Q	Q	I	E	N	D	R	M	K	K	M	L	E	D	R	Q	F	P	E
Template Known Secondary structure														S		.	.	.			S																.	.	.	.	.	.	.	T	S							T	T	S	B							S	S														T	B
Template Predicted Secondary structure																.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.								.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	E	R	V	F	K	S	K	E	M	L	L	I	N	L	H	E	R	D	D	L	A	P	Y	E	R	M	L	F	D	T	W	G	N	Q	I	Q	T	L	C	L	L	P	L	M	S	G	D	T	M	L	G	V	L	K	L	A	Q	C	E	E	K	V	F	T	T	T	N	L	N	L	L	R	Q	I	A	E	R
Query Conservation
Alig confidence																																				.	.	.	.																							.
Template Conservation																																				.	.	.	.																							.
Template Sequence		E	Y	T	K	N	L	F	N	V	P	E	T	S	S	N	L	D	I	N	S	E	T	A	F	P	V	E	N	R	D	L	F	Q	A	.	.	.	.	G	L	T	T	I	V	P	I	I	G	G	G	E	R	L	G	T	L	I	L	S	R	.	L	Q	D	Q	F	N	D	D	D	L	I	L	A	E	Y	G	A	T	V
Template Known Secondary structure									T			S							T	T					S		G	G	G	G	G	G	G	S	S	.	.	.	.	S										T	T											.	S	S
Template Predicted Secondary structure																																				.	.	.	.																							.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	I	A	V	D	N	A	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	M	E	I	L	R	E	K	A
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions