Job Description P19323 Confidence 99.28% Date Thu Jan 5 11:37:18 GMT 2012 Rank 79 Aligned Residues 212 % Identity 25% Template c2dhrC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:ftsh; PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l) Resolution 3.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.											.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	T	E	Q	L	N	N	V	D	S	E	F	G	E	I	I	G	R	S	E	A	M	Y	S	V	L	K	Q	V	E	M	V	A	Q	S	.	.	.	.	.	.	.	.	.	.	D	S	T	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	H	N	L	S	G	R	N	N	R	R	M	V	K
Query Conservation																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		R	A	R	V	L	T	E	A	P	K	V	T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	R	V	.	.	.	P	F	I	T
Template Known Secondary structure								S						T	T	S	S		S																		G	G	G	T	T	T	T	S					S							S	T	T	S	S												T	T		.	.	.
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.												.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	C	A	A	M	P	A	G	L	L	E	S	D	L	F	G	H	E	R	G	A	F	T	G	A	S	A	Q	R	I	G	R	F	E	L	A	D	K	S	S	L	F	L	D	E	V	G	D	M	.	.	.	.	.	.	.	.	.	.	.	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																																																																		.	.	.
Template Sequence		A	S	G	.	.	.	.	.	.	.	.	.	S	D	F	V	E	M	F	V	G	V	G	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	R	G	S	G	V	G	G	G	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	.	.	.
Template Known Secondary structure				G	.	.	.	.	.	.	.	.	.	G	G	G	T	S	S		T	T											T	T	S	T	T	S	S	S								G	G	G	T				S	S	S	S	T	T	T	S	S														G	G	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																																																		.	.	.
Template SS confidence
		220	.	.										.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	S	N	K	I	I	Q	T	D	V	R	L	I	A	A	T	N	R	D	L	K	K	M	V	A	D	R	E	F	R	S	D	L	Y	Y	R	L	N	V	F	P	I	H	L	P	P	L	R	E	R	P	E	D	I	P	L	L	A	K	A	F	T	F	K	I	A	R	R	L	G	R	N	I	D	S	I	P	A	E
Query Conservation
Alig confidence		.	.	.																		.	.																.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																		.	.																.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	G	F	E	K	D	T	A	I	V	V	M	A	A	T	N	R	P	.	.	D	I	L	D	P	A	L	L	R	P	G	R	F	D	R	.	.	Q	I	A	I	D	A	P	D	V	K	G	R	E	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	L	R	I	H	A	R	G	K	P	L	A	E	D	V
Template Known Secondary structure		.	.	.	G			S	S										S		G	.	.	G	G	S		T	T	T	S	S	T	T	S	S			.	.														.	.	.	.	.	.	.	.	.	.	.	.						T	T	S	S	S					S	S
Template Predicted Secondary structure		.	.	.																		.	.																.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330	.	.													.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		585	.	.	.	.	590	.	.	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		T	L	R	T	L	S	N	M	E	W	P	G	.	N	V	R	E	L	E	N	V	I	E	R	A	V	L	L	T
Query Conservation														.
Alig confidence										.				.
Template Conservation										.
Template Sequence		D	L	A	L	L	A	K	R	.	T	P	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A
Template Known Secondary structure		T	T					T	T	.	S		S
Template Predicted Secondary structure										.
Template SS confidence
		349	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions