Job Description P19323 Confidence 100.00% Date Thu Jan 5 11:37:18 GMT 2012 Rank 9 Aligned Residues 329 % Identity 14% Template c1ykdB_ PDB info PDB header:lyase Chain: B: PDB Molecule:adenylate cyclase; PDBTitle: crystal structure of the tandem gaf domains from a cyanobacterial2 adenylyl cyclase: novel modes of ligand-binding and dimerization Resolution 1.90 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	G	L	F	D	I	T	R	T	L	L	Q	Q	P	D	L	A	S	L	C	E	A	L	S	Q	L	V	K	R	S	A	L	A	D	N	A	A	I	V	L	W	Q	A	Q	T	Q	R	A	S	Y	Y	A	S	R	E	K	D	T	P	I	K	Y	E	D	E	T	V	L	A	H	G	P	V	R	S	I	L	S	R
Query Conservation
Alig confidence																																																													.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		V	H	Q	T	L	S	M	L	D	S	H	G	F	E	N	I	L	Q	E	M	L	Q	S	I	T	L	K	T	G	E	L	L	G	A	D	R	T	T	I	F	L	L	D	E	E	K	Q	E	L	W	S	I	V	A	A	G	S	L	E	.	.	.	.	.	I	R	I	P	A	D	K	G	I	A	G	E	V	A	T	F
Template Known Secondary structure										T	T	S																						T											T	T	T	T													.	.	.	.	.					T	T	S
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.																.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																.	.	.																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	T	L	H	C	S	Y	E	E	F	C	E	T	.	.	.	W	P	Q	L	D	A	G	G	L	Y	P	K	F	G	H	Y	C	L	M	P	L	A	A	.	E	G	H	I	F	G	G	C	E	F	I	R	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	P	W	S	E	K	E	F	N
Query Conservation																.	.	.																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Q	V	V	N	I	P	F	D	F	Y	H	D	P	R	S	I	F	A	Q	K	Q	E	K	I	T	G	Y	R	T	Y	T	M	L	A	L	P	L	L	S	E	Q	G	R	L	V	A	V	V	Q	L	L	N	K	L	K	P	Y	S	P	P	D	A	L	L	A	E	R	I	D	N	Q	G	F	T	S	A	D	E	Q
Template Known Secondary structure									S		G	G	G	S	G	G	G															S										T	T													B		S				T	T							B		T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Q	T	F	T	Q	I	V	S	V	V	T	E	Q	I	Q	S	R	V	V	N	N	V	D	Y	E	L	L	C	R	E	R	D	N	F	R	I	L	V	A	I	T	N	A	V	L	S	R	L	D	M	D	E	L	V	S	E	V	A	K	E	I	H	Y	Y	F	D	I	D	D	I	S	I	V	L	R	S	H	R
Query Conservation
Alig confidence																														.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.
Template Sequence		L	F	Q	E	F	A	P	S	I	R	L	I	L	E	S	S	R	S	F	Y	I	A	T	Q	K	Q	R	A	.	.	.	.	.	.	A	A	A	M	M	K	A	V	K	S	L	S	Q	S	S	L	D	L	E	D	T	L	K	R	V	M	D	E	A	K	E	L	M	N	A	D	R	S	T	L	W	L	I	D	R	D
Template Known Secondary structure				T	T	T																								.	.	.	.	.	.													T																				T	T											T	T
Template Predicted Secondary structure																														.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.
Predicted Secondary structure																																															.																																	.
Query SS confidence																																															.																																	.
Query Sequence		K	N	K	L	N	I	Y	S	T	H	Y	L	D	K	Q	H	P	A	H	E	Q	S	E	V	D	E	A	G	T	L	T	E	R	V	F	K	S	K	E	M	L	L	I	N	L	.	H	E	R	D	D	L	A	P	Y	E	R	M	L	F	D	T	W	G	N	Q	I	Q	T	L	C	L	L	P	L	M	S	G	.	D
Query Conservation																																															.																																	.
Alig confidence																				.	.	.	.																								.																																	.
Template Conservation																				.	.	.	.
Template Sequence		R	H	E	L	W	T	K	I	T	Q	D	N	G	S	T	K	E	L	.	.	.	.	R	V	P	I	G	K	G	F	A	G	I	V	A	A	S	G	Q	K	L	N	I	P	F	D	L	Y	D	H	P	D	S	A	T	A	K	Q	I	D	Q	Q	N	G	Y	R	T	C	S	L	L	C	M	P	V	F	N	G	D	Q
Template Known Secondary structure		T	T									T	T	T						.	.	.	.				T	T	S																	S		G	G	G	S	T	T	T											T														S	S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		310	.	.	.	.	.	.	.																					.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	M	L	G	V	L	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	C	E	E	K	V	F	T	T	T	N	L	N	L	L	R	Q	I	A	E	R	V	A	I	A	V	D	N	A	L	A	Y	Q	E	I	H
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	I	G	V	T	Q	L	V	N	K	K	K	T	G	E	F	P	P	Y	N	P	E	T	W	P	I	A	P	E	C	F	Q	A	S	F	D	R	N	D	E	E	F	M	E	A	F	N	I	Q	A	G	V	A	L	Q	N	A	Q	L	F	A	T	V	K
Template Known Secondary structure															S	S							G	G	G	T	T	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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