Job Description P19323 Confidence 91.01% Date Thu Jan 5 11:37:18 GMT 2012 Rank 326 Aligned Residues 135 % Identity 21% Template c1w36G_ PDB info PDB header:recombination Chain: G: PDB Molecule:exodeoxyribonuclease v alpha chain; PDBTitle: recbcd:dna complex Resolution 3.1 Å

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		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.					.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.											.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	V	E	M	V	A	Q	S	D	S	T	V	L	I	L	G	E	T	G	T	G	K	E	L	I	A	R	A	I	.	.	.	.	H	N	L	S	G	R	N	N	R	R	M	V	K	M	N	C	A	A	M	P	A	G	L	L	E	S	D	L	F	.	.	.	.	.	.	.	.	.	.	G	H	E	R	G	A	F
Query Conservation																																.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	A	A	A	V	A	L	T	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q	L	P	L	T	D	E	Q	K	K	R	I	P
Template Known Secondary structure										T	B	S								T	T	S	T															T		S	S	S								B	S	S												T					S	T	T			S					S		S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		459	460	.	.	.			.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		T	G	A	S	A	.	.	Q	R	I	G	R	F	E	L	A	D	K	S	S	L	F	L	D	E	V	G	D	M	P	L	E	L	Q	P	K	L	L	R	V	L	Q	E	Q	E	F	E	R	L	G	S	N	K	I	I	Q	T	D	V	R	L	I	A	A	T	N	R	D	L	K	K	M	V	A	D	R	E	F	R	S
Query Conservation							.	.
Alig confidence							.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	A	S	T	L	H	R	L	L	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	S	M	I	D	L	P	M	M	S	R	L	I	D	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	H	A	R	V	I	F	L	G	D	R	D	Q	L	A	S	V	E	A	G	A	V	L	G
Template Known Secondary structure					B	T	T	T	S				T	T	S			S		S						S	G	G	G		B											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T									T	T	S					S	T	T	B
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.															.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		537	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	Y	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	C	A	Y
Template Known Secondary structure				G	G	G
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions