Job Description P19323 Confidence 99.18% Date Thu Jan 5 11:37:18 GMT 2012 Rank 89 Aligned Residues 59 % Identity 17% Template c1umqA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity Resolution UNK

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		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	P	E	P	E	T	P	P	A	A	T	V	V	A	L	E	G	E	D	E	Y	Q	L	I	V	R	V	L	K	E	T	N	G	V	V	A	G	P	K	G	A	A	Q	R	L	G	L	K	R	T	T	L	L	S	R	M	K	R	L	G	I
Query Conservation
Alig confidence																																				.	.	.
Template Conservation																																				.	.	.
Template Sequence		L	A	K	G	E	S	L	P	P	P	P	E	N	P	M	S	A	D	R	V	R	W	E	H	I	Q	R	I	Y	E	M	C	D	R	.	.	.	N	V	S	E	T	A	R	R	L	N	M	H	R	R	T	L	Q	R	I	L	A	K	R	S	P
Template Known Secondary structure					T	T	S	S				S		S	S	S																	T	T	S	.	.	.										T	S											T	S	S
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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