Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence91.61%DateThu Jan 5 11:37:18 GMT 2012
Rank307Aligned Residues39
% Identity18%Templatec1u78A_
PDB info PDB header:dna binding protein/dnaChain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
Resolution2.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   643......650.........660.........670.........680.....
Predicted Secondary structure 










Query SS confidence 










































Query Sequence  EDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLG
Query Conservation    
   
  

    
   
   

  


 
 

 



  
Alig confidence 










.



...























Template Conservation     
  
  
 .  
 ...
   

  

 
  

   

   
Template Sequence  DTERAQLDVMK. LLNV. . . SLHEMSRKISRSRHCIRVYLKDPV
Template Known Secondary structure  .TT
...
T

SGG
Template Predicted Secondary structure  .


...



Template SS confidence 










































   910......... 20... ......30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions