Return to main results Retrieve Phyre Job Id

Job DescriptionP19323
Confidence86.70%DateThu Jan 5 11:37:18 GMT 2012
Rank433Aligned Residues43
% Identity9%Templatec1r71B_
PDB info PDB header:transcription/dnaChain: B: PDB Molecule:transcriptional repressor protein korb; PDBTitle: crystal structure of the dna binding domain of korb in2 complex with the operator dna
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   644.....650.........660.........670.........680.........
Predicted Secondary structure 












Query SS confidence 













































Query Sequence  DEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGIDKS
Query Conservation   
   
  

    
   
   

  


 
 

 



  

   
Alig confidence 














...



























Template Conservation   
 
     
   
 ...
  


  

 
 
 

  
 
  

  
Template Sequence  REIADFIGRELAKGK. . . KKGDIAKEIGKSPAFITQHVTLLDLPEK
Template Known Secondary structure  TT
...
TT

GGGS

Template Predicted Secondary structure 


...






Template SS confidence 













































   155....160......... 170.........180.........190.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions